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motifDb PFM vs JASPAR database PFM: conversion to PWM
motifdb jaspar pwm pfm written 7 months ago by chrisclarkson100 • 30 • updated 6 months ago by Bioconductor Community ♦♦ 0
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Plotting motif enrichment vs background - Jaspar core vertebrates
jaspar meme pwm motifs motif analysis written 7 months ago by rbronste • 60
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trouble accessing JASPAR2018.sqlite
rsqlite jaspar written 16 months ago by m.d.shapiro • 0 • updated 16 months ago by James W. MacDonald ♦ 50k
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Error: unable to find an inherited method for function searchSeq for signature matrix
tfbstools jaspar pwm written 22 months ago by chrisclarkson100 • 30 • updated 22 months ago by Ge Tan • 20
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TF ANALYSIS USING JASPAR
transcription jaspar written 2.3 years ago by nia • 10 • updated 2.3 years ago by James W. MacDonald ♦ 50k
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Identifying TF binding sites (Motifdb + TxDb.Hsapiens.UCSC.hg19.knownGene)
motifdb jaspar transcription factor binding site written 3.7 years ago by Lisa Hopcroft • 40
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TFBSTools access to JASPAR2014 via getMatrixSet()
tfbstools jaspar written 3.8 years ago by JasonLouisStein • 0 • updated 3.8 years ago by Ge Tan • 20
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Problem with rGADEM & MotIV - one matrix consensus after GADEM() and one plot enrichment motif
chipseq rgadem motiv jaspar written 4.2 years ago by w.jarassier • 0 • updated 4.1 years ago by emercier • 0
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