Showing: limma-voomreset
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Inconsistent result between limma/voom and DESeq2
rnaseq limma deseq2 voom limma-voom written 10 months ago by bharata180340 • updated 10 months ago by Gordon Smyth38k
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Limma-voom with external observation weights
limma limma-voom written 19 months ago by Peter Langfelder2.2k • updated 19 months ago by Gordon Smyth38k
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quantile normalization takes into account library size?
quantile normalization limma-voom written 20 months ago by bilcodygm0 • updated 20 months ago by Gordon Smyth38k
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voomWithQualityWeights, design and weights
voom rna-seq limma-voom voomwithqualityweights written 20 months ago by anne.biton10 • updated 20 months ago by Matthew Ritchie780
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What is the impact of using GOSeq to voom-adjusted RNA-seq Expressions ?
limma goseq limma-voom written 20 months ago by joelrosa0 • updated 20 months ago by Gordon Smyth38k
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assess quality of data
rnaseq edger limma-voom written 21 months ago by bilcodygm0 • updated 21 months ago by Michael Love25k
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normalization affects drastically limma-voom + sva results
normalization sva limma-voom written 2.2 years ago by aec50 • updated 2.2 years ago by Gordon Smyth38k
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Applying sva is compatible with limma duplicateCorrelation?
sva duplicatecorrelation limma-voom written 2.2 years ago by aec50 • updated 2.2 years ago by sina.nassiri70
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Is there any point to TMM-normalize TPM prior to limma-voom?
edger voom tximport limma-voom written 2.6 years ago by johnmcma10 • updated 2.6 years ago by Ryan C. Thompson7.4k
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Limma voom mechanism
rnaseq limma tutorial limma-voom written 2.6 years ago by icxa04090 • updated 2.6 years ago by Aaron Lun25k
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edgeR QL with voom weights
edger voom limma-voom written 2.7 years ago by gregory.l.stone10 • updated 2.7 years ago by Aaron Lun25k
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limma contrast with interaction and paired samples
limma limma-voom written 2.7 years ago by gregory.l.stone10 • updated 2.7 years ago by Aaron Lun25k
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