1
vote
1
answer
60
views
1
answer
MEDIP: Problem with MEDIPS.createSet
bsgenome medips medip-seq written 4 weeks ago by vjain0 • updated 4 weeks ago by Lukas Chavez470
0
votes
1
answer
77
views
1
answer
RMS question in MEDIPS
medips rpkm rms written 7 weeks ago by enrique.yeh0 • updated 7 weeks ago by Lukas Chavez470
0
votes
2
answers
437
views
2
answers
3
votes
1
answer
263
views
1
answer
CNV parameter not working - MEDIPS
medips error medip-seq lukas written 11 months ago by anupriyaverma14080 • updated 11 months ago by Matthias Lienhard140
1
vote
1
answer
194
views
1
answer
Window size for MEDIPS
medips peak finding medip-seq luckas written 11 months ago by anupriyaverma14080 • updated 11 months ago by Lukas Chavez470
0
votes
2
answers
461
views
2
answers
MeQA and MEDIPS
medips bioconductor meqa written 23 months ago by manish.kumar0 • updated 11 months ago by palchamy0
0
votes
1
answer
200
views
1
answer
How does the function MEDIPS.CpGenrich work?
medips written 11 months ago by stb0 • updated 11 months ago by Lukas Chavez470
3
votes
1
answer
223
views
1
answer
0
votes
1
answer
283
views
1
answer
Error raised during execution of MEDIPS package
medips written 13 months ago by pinky_pinkpinky0 • updated 13 months ago by Lukas Chavez470
0
votes
1
answer
287
views
1
answer
MEDIPS: case study with different replicate numbers of control and case
medips written 15 months ago by fmhsu01140 • updated 15 months ago by Lukas Chavez470
0
votes
1
answer
244
views
1
answer
Insertion size when using 'paired' in MEDIPS.createSet()
medips R medip-seq pair-end reads written 16 months ago by stb0 • updated 16 months ago by Lukas Chavez470
0
votes
1
answer
272
views
1
answer
0
votes
1
answer
297
views
1
answer
0
votes
1
answer
388
views
1
answer
MEDIPS - do reads without CG's get filtered out prior to analysis?
medips written 18 months ago by chu_shirley0 • updated 18 months ago by Lukas Chavez470
0
votes
1
answer
224
views
1
answer
How does the 'paired' argument works in MeDIPS 1.23.2
medips R medip-seq pair-end reads written 19 months ago by stb0 • updated 19 months ago by Lukas Chavez470
0
votes
1
answer
317
views
1
answer
Gene Symbol Annotation
medips written 20 months ago by peter.mcerlean0 • updated 20 months ago by Lukas Chavez470
0
votes
1
answer
242
views
1
answer
TMM Normalization within MEDIPS ups some zero counts, is this normal?
medips written 20 months ago by jenniferlneary0 • updated 20 months ago by Lukas Chavez470
1
vote
1
answer
333
views
1
answer
MeDIPS and use of the 'bwa' parameter
medips R bwa medip-seq written 20 months ago by stb0 • updated 20 months ago by Lukas Chavez470
1
vote
2
answers
275
views
2
answers
Alternative methylation contexts with MEDIPS?
medips written 20 months ago by Chris Fields60 • updated 20 months ago by Matthias Lienhard140
0
votes
4
answers
378
views
4
answers
MEDIPS - input
medips input written 22 months ago by Gilgi20
0
votes
0
answers
354
views
0
answers
0
votes
1
answer
551
views
1
answer
0
votes
2
answers
489
views
2
answers
0
votes
1
answer
617
views
1
answer
Error in MEDIPS.calibrationCurve looking for different methylation profiles
medips R written 2.2 years ago by pertille0 • updated 2.2 years ago by Lukas Chavez470
0
votes
1
answer
415
views
1
answer
How to do FDR p.adj manually on "mr.edgeR object" from MEDIPS package?
edger medips R written 2.2 years ago by pertille0 • updated 2.2 years ago by Lukas Chavez470
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