3
votes
1
answer
75
views
1
answer
CNV parameter not working - MEDIPS
medips error medip-seq lukas written 10 days ago by anupriyaverma14080 • updated 10 days ago by Matthias Lienhard120
1
vote
1
answer
56
views
1
answer
Window size for MEDIPS
medips peak finding medip-seq luckas written 14 days ago by anupriyaverma14080 • updated 14 days ago by Lukas Chavez470
0
votes
2
answers
244
views
2
answers
MeQA and MEDIPS
medips bioconductor meqa written 12 months ago by manish.kumar0 • updated 16 days ago by palchamy0
0
votes
1
answer
74
views
1
answer
How does the function MEDIPS.CpGenrich work?
medips written 28 days ago by stb0 • updated 28 days ago by Lukas Chavez470
3
votes
1
answer
67
views
1
answer
0
votes
1
answer
100
views
1
answer
Error raised during execution of MEDIPS package
medips written 12 weeks ago by pinky_pinkpinky0 • updated 10 weeks ago by Lukas Chavez470
0
votes
1
answer
141
views
1
answer
MEDIPS: case study with different replicate numbers of control and case
medips written 4 months ago by fmhsu01140 • updated 4 months ago by Lukas Chavez470
0
votes
1
answer
109
views
1
answer
Insertion size when using 'paired' in MEDIPS.createSet()
medips R medip-seq pair-end reads written 5 months ago by stb0 • updated 5 months ago by Lukas Chavez470
0
votes
1
answer
151
views
1
answer
0
votes
1
answer
130
views
1
answer
0
votes
1
answer
207
views
1
answer
MEDIPS - do reads without CG's get filtered out prior to analysis?
medips written 7 months ago by chu_shirley0 • updated 7 months ago by Lukas Chavez470
0
votes
1
answer
107
views
1
answer
How does the 'paired' argument works in MeDIPS 1.23.2
medips R medip-seq pair-end reads written 8 months ago by stb0 • updated 8 months ago by Lukas Chavez470
0
votes
1
answer
157
views
1
answer
Gene Symbol Annotation
medips written 9 months ago by peter.mcerlean0 • updated 9 months ago by Lukas Chavez470
0
votes
1
answer
207
views
1
answer
MeDIPS: warning when using "ttest" settings in MEDIPS.meth
medips R medip-seq written 9 months ago by stb0 • updated 9 months ago by Lukas Chavez470
0
votes
1
answer
151
views
1
answer
TMM Normalization within MEDIPS ups some zero counts, is this normal?
medips written 9 months ago by jenniferlneary0 • updated 9 months ago by Lukas Chavez470
1
vote
1
answer
187
views
1
answer
MeDIPS and use of the 'bwa' parameter
medips R bwa medip-seq written 9 months ago by stb0 • updated 9 months ago by Lukas Chavez470
1
vote
2
answers
172
views
2
answers
Alternative methylation contexts with MEDIPS?
medips written 9 months ago by Chris Fields60 • updated 9 months ago by Matthias Lienhard120
0
votes
4
answers
219
views
4
answers
MEDIPS - input
medips input written 11 months ago by Gilgi10
0
votes
0
answers
182
views
0
answers
0
votes
1
answer
327
views
1
answer
0
votes
2
answers
277
views
2
answers
0
votes
1
answer
395
views
1
answer
Error in MEDIPS.calibrationCurve looking for different methylation profiles
medips R written 15 months ago by pertille0 • updated 15 months ago by Lukas Chavez470
0
votes
1
answer
256
views
1
answer
How to do FDR p.adj manually on "mr.edgeR object" from MEDIPS package?
edger medips R written 15 months ago by pertille0 • updated 15 months ago by Lukas Chavez470
2
votes
1
answer
233
views
1
answer
How createSet from reduced "paire-ed" sequencing on MeDIPS?
medips R input files written 15 months ago by pertille0 • updated 15 months ago by Lukas Chavez470
0
votes
1
answer
319
views
1
answer
MEDIPS stable version problem
medips written 17 months ago by chengyuanzhi19860 • updated 16 months ago by Lukas Chavez470
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