0
votes
2
answers
265
views
2
answers
3
votes
1
answer
113
views
1
answer
CNV parameter not working - MEDIPS
medips error medip-seq lukas written 10 weeks ago by anupriyaverma14080 • updated 10 weeks ago by Matthias Lienhard120
1
vote
1
answer
91
views
1
answer
Window size for MEDIPS
medips peak finding medip-seq luckas written 10 weeks ago by anupriyaverma14080 • updated 10 weeks ago by Lukas Chavez470
0
votes
2
answers
296
views
2
answers
MeQA and MEDIPS
medips bioconductor meqa written 14 months ago by manish.kumar0 • updated 10 weeks ago by palchamy0
0
votes
1
answer
112
views
1
answer
How does the function MEDIPS.CpGenrich work?
medips written 12 weeks ago by stb0 • updated 12 weeks ago by Lukas Chavez470
3
votes
1
answer
100
views
1
answer
0
votes
1
answer
127
views
1
answer
Error raised during execution of MEDIPS package
medips written 4 months ago by pinky_pinkpinky0 • updated 4 months ago by Lukas Chavez470
0
votes
1
answer
176
views
1
answer
MEDIPS: case study with different replicate numbers of control and case
medips written 6 months ago by fmhsu01140 • updated 6 months ago by Lukas Chavez470
0
votes
1
answer
142
views
1
answer
Insertion size when using 'paired' in MEDIPS.createSet()
medips R medip-seq pair-end reads written 7 months ago by stb0 • updated 7 months ago by Lukas Chavez470
0
votes
1
answer
185
views
1
answer
0
votes
1
answer
166
views
1
answer
0
votes
1
answer
249
views
1
answer
MEDIPS - do reads without CG's get filtered out prior to analysis?
medips written 9 months ago by chu_shirley0 • updated 9 months ago by Lukas Chavez470
0
votes
1
answer
135
views
1
answer
How does the 'paired' argument works in MeDIPS 1.23.2
medips R medip-seq pair-end reads written 10 months ago by stb0 • updated 10 months ago by Lukas Chavez470
0
votes
1
answer
196
views
1
answer
Gene Symbol Annotation
medips written 11 months ago by peter.mcerlean0 • updated 11 months ago by Lukas Chavez470
0
votes
1
answer
180
views
1
answer
TMM Normalization within MEDIPS ups some zero counts, is this normal?
medips written 11 months ago by jenniferlneary0 • updated 11 months ago by Lukas Chavez470
1
vote
1
answer
232
views
1
answer
MeDIPS and use of the 'bwa' parameter
medips R bwa medip-seq written 11 months ago by stb0 • updated 11 months ago by Lukas Chavez470
1
vote
2
answers
205
views
2
answers
Alternative methylation contexts with MEDIPS?
medips written 11 months ago by Chris Fields60 • updated 11 months ago by Matthias Lienhard120
0
votes
4
answers
263
views
4
answers
MEDIPS - input
medips input written 13 months ago by Gilgi10
0
votes
0
answers
215
views
0
answers
0
votes
1
answer
366
views
1
answer
0
votes
2
answers
317
views
2
answers
0
votes
1
answer
430
views
1
answer
Error in MEDIPS.calibrationCurve looking for different methylation profiles
medips R written 17 months ago by pertille0 • updated 17 months ago by Lukas Chavez470
0
votes
1
answer
288
views
1
answer
How to do FDR p.adj manually on "mr.edgeR object" from MEDIPS package?
edger medips R written 17 months ago by pertille0 • updated 17 months ago by Lukas Chavez470
2
votes
1
answer
261
views
1
answer
How createSet from reduced "paire-ed" sequencing on MeDIPS?
medips R input files written 17 months ago by pertille0 • updated 17 months ago by Lukas Chavez470
0
votes
1
answer
359
views
1
answer
MEDIPS stable version problem
medips written 19 months ago by chengyuanzhi19860 • updated 18 months ago by Lukas Chavez470
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