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1
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77
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1
answer
2
votes
1
answer
200
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1
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DESeq2 iterative size factor normalization did not converge
microbiome phyloseq deseq2 written 11 weeks ago by couchc0 • updated 11 weeks ago by Michael Love15k
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1
answer
174
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1
answer
0
votes
2
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262
views
2
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1
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0
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309
views
0
answers
0
votes
0
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239
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0
answers
0
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2
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265
views
2
answers
2
votes
1
answer
269
views
1
answer
0
votes
2
answers
645
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2
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DESeq2 16s microbiome size factors
rnaseq microbiome deseq2 metagenomeseq 16s written 14 months ago by jbatsx0 • updated 14 months ago by Joseph Nathaniel Paulson260
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4
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1.2k
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4
answers
0
votes
0
answers
294
views
0
answers
4
votes
2
answers
362
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2
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Analyzing microbiome data (many zero-counts) using DESeq2
microbiome deseq2 zero-inflated written 16 months ago by pjgalli20 • updated 16 months ago by Michael Love15k
0
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1
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411
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1
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deseq2 analysis, accounting for pen effect
microbiome deseq2 written 2.0 years ago by bjarke0 • updated 2.0 years ago by Steve Lianoglou12k
2
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1
answer
688
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1
answer
1
vote
2
answers
647
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2
answers
2
votes
2
answers
692
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2
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normFactors when aggregating in metagenomeSeq
microbiome metagenomeseq written 2.8 years ago by noelle.noyes30 • updated 2.8 years ago by Joseph Nathaniel Paulson260
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1
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1.4k
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1
answer
1
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1
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557
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1
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2
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2
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385
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2
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2
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2
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567
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2
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1
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1
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687
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1
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0
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1
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439
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1
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1
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2
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2.6k
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2
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0
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3
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1.6k
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3
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2
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5
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593
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5
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phyloseq/DESeq gives negative transformed values
microbiome deseq written 3.6 years ago by Sophie Josephine Weiss130 • updated 3.6 years ago by Michael Love15k
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