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Uncertain about PCA plot for DESeq2 analysis
rnaseq deseq2 bioconductor pca written 6 weeks ago by pepere40 • updated 6 weeks ago by Michael Love22k
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Top variable features used by 'runPCA' in scater
pca scater features written 10 weeks ago by jws0 • updated 10 weeks ago by Aaron Lun22k
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Looking for Batch effects in PCA
batch effect pca written 7 months ago by K50
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186
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Principle component analysis plot with gene expression data
rnaseq edger R pca ggbiplot written 9 months ago by Biologist70 • updated 9 months ago by James W. MacDonald49k
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PCA from TPM
pca tpm tximport written 16 months ago by tanyabioinfo20
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483
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PCA plot for TPM data
pca written 16 months ago by tanyabioinfo20 • updated 16 months ago by Andy9160
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668
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identifying the samples on plotPCA
deseq2 pca plotpca written 16 months ago by lirongrossmann20 • updated 16 months ago by Michael Love22k
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What to use: PCA or tSNE dimension reduction in DESeq2 analysis?
rnaseq deseq2 pca tsne written 20 months ago by s.w.vanderlaan20 • updated 20 months ago by Kushal K Dey10
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313
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pca plot for tissues and protein values
pca written 21 months ago by gv40 • updated 21 months ago by James W. MacDonald49k
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gage pca loadings
gage pca loadings written 22 months ago by MT0
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398
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pcaGoPromoter PCA plot in R: issue with EntrezID conversion
pca pca plot pcagopromoter written 23 months ago by sherman.leung10 • updated 23 months ago by James W. MacDonald49k
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pcaExplorer error displaying PCA plot
pca pcaexplorer written 2.3 years ago by swaegers.janne0 • updated 2.3 years ago by Federico Marini110
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SVA and proportion of variance explained
sva pca svd explained variance written 2.3 years ago by Mattia10 • updated 2.3 years ago by Jeff Leek540
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448
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Insert PCA in design model for adjusting
pca written 2.3 years ago by mheydarpour10 • updated 2.3 years ago by James W. MacDonald49k
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