0
votes
1
answer
61
views
1
answer
0
votes
0
answers
52
views
0
answers
0
votes
0
answers
137
views
0
answers
0
votes
1
answer
119
views
1
answer
Is mean adjusted for purity?
purecn mean ratio written 11 weeks ago by twtoal0 • updated 11 weeks ago by markus.riester90
3
votes
1
answer
178
views
1
answer
Understanding PureCN and its germline SNPs
snp purecn germline written 4 months ago by twtoal0 • updated 11 weeks ago by kakbrus0
0
votes
1
answer
93
views
1
answer
Is C adjusted for purity?
purecn adjusted c written 12 weeks ago by twtoal0 • updated 12 weeks ago by markus.riester90
0
votes
0
answers
118
views
0
answers
0
votes
1
answer
83
views
1
answer
PureCN removemapq0 parameter
purecn removemapq0 written 12 weeks ago by twtoal0 • updated 12 weeks ago by markus.riester90
0
votes
0
answers
84
views
0
answers
0
votes
1
answer
100
views
1
answer
0
votes
1
answer
89
views
1
answer
PureCN use of VCF QUAL column for filtering when column is dot
vcf purecn qual written 3 months ago by twtoal0 • updated 3 months ago by markus.riester90
0
votes
1
answer
108
views
1
answer
0
votes
1
answer
84
views
1
answer
Dx.R somatic_ontarget column
purecn written 3 months ago by twtoal0 • updated 3 months ago by markus.riester90
0
votes
1
answer
79
views
1
answer
coverage QC file mean duplication and "mom" columns
coverage purecn written 3 months ago by twtoal0 • updated 3 months ago by markus.riester90
1
vote
1
answer
105
views
1
answer
PureCN Release Notes
release purecn written 3 months ago by twtoal0 • updated 3 months ago by James W. MacDonald47k
0
votes
1
answer
142
views
1
answer
VCF file non-SNP germline mutations
snp vcf purecn written 3 months ago by twtoal0 • updated 3 months ago by markus.riester90
0
votes
1
answer
93
views
1
answer
PureCN warning: test.num.copy outside recommended range
warning purecn written 3 months ago by twtoal0 • updated 3 months ago by markus.riester90
0
votes
2
answers
107
views
2
answers
0
votes
1
answer
74
views
1
answer
PureCN Panel of Normals contents
purecn written 3 months ago by twtoal0 • updated 3 months ago by markus.riester90
0
votes
1
answer
96
views
1
answer
No CNAs or SNVs in results
purecn written 3 months ago by twtoal0
1
vote
1
answer
92
views
1
answer
PureCN support for indels
indels purecn written 4 months ago by twtoal0 • updated 4 months ago by markus.riester90
0
votes
1
answer
228
views
1
answer
errors in version 1.7.53
purecn written 10 months ago by xiao.qiao.liu0 • updated 10 months ago by markus.riester90
0
votes
1
answer
210
views
1
answer
errors in Purecn callLOH
purecn written 10 months ago by xiao.qiao.liu0 • updated 10 months ago by markus.riester90
2
votes
1
answer
226
views
1
answer
PureCN can classify indel variants as germline vs. somatic ?
indel purecn somatic germline written 14 months ago by pathkim0 • updated 14 months ago by markus.riester90
0
votes
1
answer
341
views
1
answer
how to make sure PureCN gets somatic status from VCF?
purecn written 20 months ago by eddieasalinas0 • updated 20 months ago by markus.riester90
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