Showing: purecnreset
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callLOH output file NA values
purecn na values written 3 months ago by twtoal0 • updated 3 months ago by markus.riester110
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PureCN.R warning "duplicate keys in header will be forced to unique rownames"
purecn written 3 months ago by twtoal0 • updated 3 months ago by markus.riester110
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Issue with BiocParallel
biocparallel purecn written 10 months ago by milos-910
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Copy ratio close to but not exactly 1
purecn copyratio written 10 months ago by twtoal0 • updated 10 months ago by markus.riester110
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Assigning DUP/DEL p-value to CNV segment
purecn written 10 months ago by twtoal0
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Copy ratio threshold for calling actual CNV
purecn threshold copy-ratio written 10 months ago by twtoal0 • updated 10 months ago by markus.riester110
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CNV in Normal Samples?
cnv purecn germline normal written 11 months ago by twtoal0 • updated 11 months ago by markus.riester110
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PureCN recover optimum solution
purecn optimum_solution written 12 months ago by twtoal0 • updated 12 months ago by markus.riester110
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PureCN PureCN.R --rds option recreate all output files?
purecn --rds written 12 months ago by twtoal0 • updated 12 months ago by markus.riester110
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PureCN Manual Curation .rds file
purecn rds_file manual_curation written 12 months ago by twtoal0 • updated 12 months ago by markus.riester110
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PureCN optimum solution vs heat map
heatmap purecn solution written 12 months ago by twtoal0 • updated 12 months ago by markus.riester110
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Is mean adjusted for purity?
purecn mean ratio written 15 months ago by twtoal0 • updated 15 months ago by markus.riester110
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Understanding PureCN and its germline SNPs
snp purecn germline written 16 months ago by twtoal0 • updated 15 months ago by kakbrus0
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Is C adjusted for purity?
purecn adjusted c written 15 months ago by twtoal0 • updated 15 months ago by markus.riester110
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PureCN removemapq0 parameter
purecn removemapq0 written 15 months ago by twtoal0 • updated 15 months ago by markus.riester110
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PureCN use of VCF QUAL column for filtering when column is dot
vcf purecn qual written 15 months ago by twtoal0 • updated 15 months ago by markus.riester110
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