Showing: rlog • reset
Search
0
votes
1
answer
89
views
1
answer
Normalisation upstream rlog
deseq2 rlog written 11 weeks ago by zhang.jianhai • 0 • updated 11 weeks ago by Michael Love ♦ 24k
0
votes
0
answers
380
views
0
answers
rlog not found
rlog rlog transformation written 13 months ago by crowsreign42 • 0
0
votes
1
answer
478
views
1
answer
rlog transformation producing outliers with very high log-transformed counts
deseq2 rlog written 17 months ago by Frederik Ziebell • 0
1
vote
2
answers
263
views
2
answers
DESeq possible when only rlog table available? (DESeq2 package)
deseq deseq2 rlog written 18 months ago by sreibe • 0
0
votes
2
answers
608
views
2
answers
Different PCA plots using rlog and vsd on the same data set
deseq2 pca rlog variancestabilizingtransformation plotpca written 21 months ago by lirongrossmann • 20
0
votes
1
answer
674
views
1
answer
lfcshrink and rlog take forever to compute with a DESeqDataSet with many genotypes and conditions
deseq2 rlog lfcshrink written 21 months ago by pecot • 0
1
vote
1
answer
1.3k
views
1
answer
DESeq2: Difference in rlog and vst values if run transform before or after running DESeq
deseq deseq2 rlog variancestabilizingtransformation written 2.3 years ago by Zach Roe • 10 • updated 2.3 years ago by Michael Love ♦ 24k
6
votes
1
answer
1.2k
views
1
answer
regularized log transformation- loss of zero values for sparsely expressed genes
deseq2 rlog variancestabilizingtransformation rlog transformation vst written 2.9 years ago by longwoodSequencer • 0 • updated 2.9 years ago by Michael Love ♦ 24k
0
votes
2
answers
3.0k
views
2
answers
What does DESeq2 rlog() return exactly?
deseq2 rlog rlog transformation written 3.3 years ago by lanhuong • 0
3
votes
3
answers
963
views
3
answers
Large differences in sample clustering using cummeRbund (csDendro) and rlog-distance (DESeq2)
clustering cummerbund deseq2 fpkm rlog written 3.4 years ago by Jon Bråte • 150
2
votes
1
answer
1.5k
views
1
answer
Validity of using rlog transformed counts (rld) to obtain a list of expressed genes
deseq2 rlog written 3.7 years ago by sjmonkley • 20 • updated 3.7 years ago by Michael Love ♦ 24k
4
votes
1
answer
1.1k
views
1
answer
Dependence of rlog transformed value range on number of samples
deseq2 rlog written 4.1 years ago by snsansom • 20 • updated 4.1 years ago by Michael Love ♦ 24k
0
votes
1
answer
1.0k
views
1
answer
Warning in lfproc when using rlog or varianceStabilisingTransformation from DESeq2
deseq2 rlog variancestabilizingtransformation lfproc written 4.2 years ago by katja • 0 • updated 4.2 years ago by Michael Love ♦ 24k
<prev • 13 results • page 1 of 1 • next >
Recent...
Replies
Votes
Awards • All »
Locations • All »
  • EMBL Heidelberg / de.NBI, 4 minutes ago
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 372 users visited in the last hour