1
vote
1
answer
116
views
5 follow
1
answer
2
votes
1
answer
115
views
1
answer
DEseq2 for several experiments with one condition
de rna-seq deseq2 written 4 days ago by elhamdallalbashi0 • updated 2 days ago by Michael Love10k
3
votes
2
answers
164
views
2
answers
DESeq2 with contaminating cell types
rna-seq deseq2 written 9 days ago by hughes.drew80 • updated 6 days ago by Michael Love10k
0
votes
1
answer
102
views
1
answer
HISAT-StringTie-Ballgown, order of biological replicates in script design
rna-seq ballgown written 10 days ago by Ir0 • updated 6 days ago by Alyssa Frazee100
0
votes
2
answers
75
views
2
answers
0
votes
0
answers
40
views
0
answers
0
votes
1
answer
79
views
1
answer
Drug datasets for RNA-seq
rna-seq data written 23 days ago by bioinformatics0 • updated 23 days ago by Gordon Smyth29k
4
votes
1
answer
116
views
1
answer
RNA-seq analysis edgeR
rna-seq edger written 9 weeks ago by es87410 • updated 9 weeks ago by Ryan C. Thompson5.2k
1
vote
1
answer
114
views
1
answer
Limma MDS plot donor effect
rna-seq limma written 9 weeks ago by es87410 • updated 9 weeks ago by Aaron Lun13k
0
votes
1
answer
80
views
1
answer
3
votes
1
answer
155
views
1
answer
edgeR RNA-seq analysis using glm
rna-seq edger written 10 weeks ago by es87410 • updated 10 weeks ago by Ryan C. Thompson5.2k
2
votes
1
answer
95
views
1
answer
0
votes
0
answers
103
views
0
answers
1
vote
1
answer
136
views
1
answer
0
votes
1
answer
87
views
1
answer
How to filter tximport output for edgeR?
rna-seq edger tximport salmon written 3 months ago by Peter0 • updated 3 months ago by Michael Love10k
2
votes
1
answer
120
views
1
answer
1
vote
3
answers
150
views
3
answers
2
votes
1
answer
164
views
1
answer
adjusted p-values and p-values problems!
pvalue R adjusted pvalue bonferroni rna-seq written 3 months ago by fromhj30410 • updated 3 months ago by Michael Love10k
1
vote
1
answer
97
views
1
answer
2
votes
2
answers
162
views
2
answers
Differential Gene Expression
rna-seq deseq2 tutorial bioinformatics written 3 months ago by fromhj30410 • updated 3 months ago by Michael Love10k
0
votes
1
answer
138
views
1
answer
Analyzing RNA-seq data by WGCNA
rna-seq wgcna written 3 months ago by bram.verstockt0 • updated 3 months ago by Peter Langfelder1.1k
3
votes
2
answers
267
views
2
answers
Pre-processing of RNA-Seq data for WGCNA and DGE
rna-seq removebatcheffect() wgcna deseq2 voom written 4 months ago by gokce.ouz0 • updated 4 months ago by Peter Langfelder1.1k
1
vote
1
answer
125
views
1
answer
RNA-seq time series data analysis
rna-seq log-linear main effects written 4 months ago by natalia.fghf0 • updated 4 months ago by Aaron Lun13k
4
votes
2
answers
126
views
2
answers
Correlation analysis taking into account multiple correlations
rna-seq correlation edger written 4 months ago by jhj8910 • updated 4 months ago by Andrew_McDavid10
0
votes
1
answer
317
views
1
answer
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