3
votes
1
answer
142
views
1
answer
1
vote
1
answer
72
views
1
answer
DESeq2 for differential gene expression on GTEx dataset
rnaseq deseq2 gtex written 3 days ago by vikram0 • updated 3 days ago by Michael Love15k
4
votes
3
answers
472
views
3
answers
Choosing a threshold for minimum counts in RNAseq
rnaseq deseq2 written 17 months ago by laianavarromartin10 • updated 8 days ago by Michael Love15k
0
votes
1
answer
121
views
1
answer
4
votes
3
answers
111
views
3
answers
3
votes
1
answer
116
views
1
answer
DESeq2 biais when genes are missing from the annotation?
rnaseq deseq2 written 10 days ago by corend0 • updated 9 days ago by Michael Love15k
0
votes
1
answer
97
views
1
answer
DESeq2 different versions
rnaseq deseq2 R written 9 days ago by minie0 • updated 9 days ago by Michael Love15k
1
vote
1
answer
131
views
1
answer
Strange distribution of logFC
rnaseq edger deseq2 differential gene expression written 10 days ago by Claire0 • updated 9 days ago by Aaron Lun17k
0
votes
1
answer
405
views
1
answer
1
vote
1
answer
120
views
1
answer
0
votes
1
answer
133
views
1
answer
0
votes
1
answer
94
views
1
answer
Design of 'group' object in DGElist function
rnaseq dgelist group egder written 18 days ago by fawazfebin0 • updated 18 days ago by Aaron Lun17k
4
votes
2
answers
164
views
2
answers
0
votes
1
answer
174
views
1
answer
2
votes
1
answer
130
views
1
answer
0
votes
1
answer
121
views
1
answer
3
votes
2
answers
130
views
2
answers
DESeq2 dispersion and p-value histograms
rnaseq deseq2 dispersion fdrtool written 26 days ago by rrcutler30 • updated 23 days ago by Bernd Klaus470
1
vote
2
answers
319
views
2
answers
Pathview pathview kegg.native=TRUE throws error in img
rnaseq pathview error bioconductor kegg written 8 months ago by guillermo.marco30 • updated 23 days ago by map208510
3
votes
1
answer
86
views
1
answer
Explainnation of featureCounts in-built annotation?
rnaseq annotation featurecounts written 27 days ago by Claire0 • updated 24 days ago by Wei Shi2.7k
2
votes
1
answer
115
views
1
answer
0
votes
1
answer
72
views
1
answer
Deseq2 group comparison
rnaseq deseq2 written 28 days ago by Hari0 • updated 26 days ago by Michael Love15k
3
votes
1
answer
87
views
1
answer
0
votes
1
answer
79
views
1
answer
Running model separately for each cell line or as the same model?
rnaseq limma edger deseq2 written 28 days ago by Ahdee40 • updated 28 days ago by k.vitting.seerup10
2
votes
1
answer
68
views
1
answer
Is my design appropriate for contrast in DESeq2?
rnaseq deseq2 design and contrast matrix written 29 days ago by dbouzo0 • updated 29 days ago by Gavin Kelly510
0
votes
1
answer
80
views
1
answer
Log2 fold change value in DESeq2
rnaseq deseq2 written 4 weeks ago by ambika.pokhrel530 • updated 4 weeks ago by Michael Love15k
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