3
votes
1
answer
78
views
1
answer
How are duplicates determined with readGAlignments/scanBam?
rsamtools genomicalignments written 22 days ago by jfiksel10 • updated 22 days ago by Mike Smith1.5k
2
votes
1
answer
78
views
1
answer
Rsamtools scanFa slow?
rsamtools written 5 weeks ago by cmdcolin10 • updated 5 weeks ago by Martin Morgan ♦♦ 19k
3
votes
1
answer
143
views
1
answer
0
votes
1
answer
106
views
1
answer
count coverage for exact matches to sequence pattern
genomicfeatures rsamtools written 11 weeks ago by Vang Le70 • updated 11 weeks ago by Michael Lawrence9.0k
0
votes
3
answers
108
views
3
answers
1
vote
1
answer
148
views
1
answer
2
votes
1
answer
118
views
1
answer
RNAseq workflow exception with Rsamtools
rsamtools genomicalignments written 6 months ago by jmlCT10 • updated 6 months ago by Mike Smith1.5k
2
votes
1
answer
195
views
1
answer
0
votes
0
answers
144
views
0
answers
Rsamtools filterBam question
rsamtools written 6 months ago by Vivek.b30
3
votes
1
answer
190
views
1
answer
Plotting only intergenic reads on chromosomes?
genomegraphs rsamtools gviz bam samtools written 7 months ago by Mehmet Ilyas Cosacak0 • updated 7 months ago by Martin Morgan ♦♦ 19k
8
votes
2
answers
165
views
2
answers
Counting ambiguously mapped reads per feature
rnaseq genomicranges rsamtools genomicalignments bam written 8 months ago by rubi60 • updated 8 months ago by Gordon Smyth30k
3
votes
1
answer
192
views
1
answer
1
vote
1
answer
140
views
1
answer
2
votes
1
answer
140
views
1
answer
inconsistent results from applyPileups and pileLettersAt
rsamtools pileup galignments written 9 months ago by jesper.gadin10 • updated 9 months ago by Martin Morgan ♦♦ 19k
0
votes
1
answer
169
views
1
answer
Error Raised When Trying To Use pileup()
biostrings shortread hilbertvis rsamtools written 10 months ago by travis.m.couture0 • updated 9 months ago by Martin Morgan ♦♦ 19k
0
votes
0
answers
229
views
0
answers
1
vote
0
answers
222
views
0
answers
0
votes
0
answers
201
views
0
answers
2
votes
1
answer
322
views
1
answer
0
votes
1
answer
237
views
1
answer
Error with Rsamtools
rsamtools written 11 months ago by alex.tamburino0 • updated 11 months ago by Martin Morgan ♦♦ 19k
1
vote
1
answer
334
views
1
answer
1
vote
1
answer
233
views
1
answer
0
votes
0
answers
200
views
0
answers
Rsamtools error Installation
rsamtools written 13 months ago by mohit0
0
votes
0
answers
282
views
0
answers
4
votes
1
answer
519
views
1
answer
Filtering a BAM file using RSamtools
rsamtools written 14 months ago by Vivek.b30 • updated 14 months ago by Martin Morgan ♦♦ 19k
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