Showing: scaterreset
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4
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scRNA-seq : Classification of cell cycle phase
scran scater written 7 weeks ago by Bogdan560 • updated 7 weeks ago by Aaron Lun24k
3
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176
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scRNA-seq : runPCA() and denoisePCA()
scran scater written 7 weeks ago by Bogdan560 • updated 7 weeks ago by Aaron Lun24k
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111
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number of cell clusters in scRNA-seq
scran scater sc3 written 7 weeks ago by Bogdan560 • updated 7 weeks ago by Aaron Lun24k
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122
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160
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2
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143
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4
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186
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Using SC3 with batch corrected MNN values
scran scater sc3 scrna-seq batch correction written 4 months ago by hamza_karakurt30 • updated 4 months ago by Vladimir Kiselev150
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235
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Log2(RPKM) counts in Bioconductor
R rpkm expression scater calcaverage written 4 months ago by kushshah10 • updated 4 months ago by Aaron Lun24k
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197
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Dunn Index for Clusters from scRNA-Seq
clustering scran scater scrna-seq dunn index written 5 months ago by hamza_karakurt30 • updated 5 months ago by Aaron Lun24k
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190
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191
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193
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scater error: invalid rownames length
scater written 5 months ago by lileijie19920 • updated 5 months ago by Aaron Lun24k
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1
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158
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1
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scran/scater Normalized matrix
scran normalized counts scater written 7 months ago by Radek60 • updated 7 months ago by Aaron Lun24k
7
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262
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1
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2
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1
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296
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Gene ID to Gene Name/Symbol in loom files
scater loomr scopeloomr written 7 months ago by Abhishek Singh20 • updated 7 months ago by Aaron Lun24k
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365
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1
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1
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213
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How to resolve these trendVar() warnings and errors
scran scater singlecellexperiment written 8 months ago by Abhishek Singh20 • updated 8 months ago by Aaron Lun24k
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217
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Top variable features used by 'runPCA' in scater
pca scater features written 8 months ago by jws0 • updated 8 months ago by Aaron Lun24k
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232
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1
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plotPlatePosition and plate_position
R scater singlecellexperiment written 8 months ago by TJ0 • updated 8 months ago by Aaron Lun24k
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1
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327
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1
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Problem installing scater
R bioconductor scater biocmanager written 8 months ago by hfberg0 • updated 8 months ago by Aaron Lun24k
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249
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Change the number of clusters with scater
clustering scran scater scrnaseq written 9 months ago by shbrief10 • updated 9 months ago by Aaron Lun24k
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