Showing: scaterreset
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scater cbind for singlecellexperiment objects problem
scater singlecellexperiment written 17 days ago by santos229030 • updated 17 days ago by Aaron Lun25k
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113
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could not find function "plotQC" in scater package
scater written 7 weeks ago by moldach20 • updated 7 weeks ago by Aaron Lun25k
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108
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Batch Corrections (MNN) with TPM values
rna-seq scran scater scrna-seq mnn written 8 weeks ago by hamza_karakurt30 • updated 8 weeks ago by Aaron Lun25k
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251
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207
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scRNA-seq : Classification of cell cycle phase
scran scater written 5 months ago by Bogdan580 • updated 5 months ago by Aaron Lun25k
3
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262
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scRNA-seq : runPCA() and denoisePCA()
scran scater written 5 months ago by Bogdan580 • updated 5 months ago by Aaron Lun25k
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159
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number of cell clusters in scRNA-seq
scran scater sc3 written 5 months ago by Bogdan580 • updated 5 months ago by Aaron Lun25k
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173
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294
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Using SC3 with batch corrected MNN values
scran scater sc3 scrna-seq batch correction written 8 months ago by hamza_karakurt30 • updated 8 months ago by Vladimir Kiselev150
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340
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Log2(RPKM) counts in Bioconductor
R rpkm expression scater calcaverage written 8 months ago by kushshah10 • updated 8 months ago by Aaron Lun25k
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261
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Dunn Index for Clusters from scRNA-Seq
clustering scran scater scrna-seq dunn index written 9 months ago by hamza_karakurt30 • updated 9 months ago by Aaron Lun25k
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326
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2
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268
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scater error: invalid rownames length
scater written 9 months ago by lileijie19920 • updated 9 months ago by Aaron Lun25k
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206
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scran/scater Normalized matrix
scran normalized counts scater written 11 months ago by Radek60 • updated 11 months ago by Aaron Lun25k
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334
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2
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404
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Gene ID to Gene Name/Symbol in loom files
scater loomr scopeloomr written 11 months ago by Abhishek Singh20 • updated 11 months ago by Aaron Lun25k
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504
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269
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How to resolve these trendVar() warnings and errors
scran scater singlecellexperiment written 12 months ago by Abhishek Singh20 • updated 12 months ago by Aaron Lun25k
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286
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Top variable features used by 'runPCA' in scater
pca scater features written 12 months ago by jws0 • updated 12 months ago by Aaron Lun25k
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