Showing: scaterreset
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77
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Dunn Index for Clusters from scRNA-Seq
clustering scran scater scrna-seq dunn index written 9 days ago by hamza_karakurt0 • updated 9 days ago by Aaron Lun23k
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82
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72
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2
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61
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scater error: invalid rownames length
scater written 27 days ago by lileijie19920 • updated 27 days ago by Aaron Lun23k
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1
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83
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1
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scran/scater Normalized matrix
scran normalized counts scater written 10 weeks ago by Radek50 • updated 10 weeks ago by Aaron Lun23k
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1
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124
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1
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2
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1
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143
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1
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Gene ID to Gene Name/Symbol in loom files
scater loomr scopeloomr written 11 weeks ago by Abhishek Singh20 • updated 11 weeks ago by Aaron Lun23k
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1
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172
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1
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1
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115
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How to resolve these trendVar() warnings and errors
scran scater singlecellexperiment written 3 months ago by Abhishek Singh20 • updated 3 months ago by Aaron Lun23k
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1
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128
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Top variable features used by 'runPCA' in scater
pca scater features written 3 months ago by jws0 • updated 3 months ago by Aaron Lun23k
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1
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131
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1
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plotPlatePosition and plate_position
R scater singlecellexperiment written 3 months ago by TJ0 • updated 3 months ago by Aaron Lun23k
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1
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174
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1
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Problem installing scater
R bioconductor scater biocmanager written 3 months ago by hfberg0 • updated 3 months ago by Aaron Lun23k
2
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1
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150
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Change the number of clusters with scater
clustering scran scater scrnaseq written 3 months ago by shbrief10 • updated 3 months ago by Aaron Lun23k
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323
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1
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0
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1
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325
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1
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Scater package PlotExpression
scater written 7 months ago by mayank.geit890
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1
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156
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1
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RNAseq scater error in plotQC()
scater scrnaseq plotqc written 7 months ago by Vladimir Krasikov90 • updated 7 months ago by Aaron Lun23k
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1
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822
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rowSums() rowMeans() don't work on sparse matrix "dgCMatrix"
scran single-cell scater written 10 months ago by MengChun Tseng10 • updated 8 months ago by Martin Morgan ♦♦ 23k
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224
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Converting scater-normalized UMI data to Monocle CellDataSet
monocle scran scater umi written 10 months ago by supremerulersuraj0 • updated 10 months ago by Aaron Lun23k
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223
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0
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2
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1.2k
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Change point size and remove outline in scater's plotPCA
rnaseq single-cell scater written 22 months ago by CodeAway30 • updated 11 months ago by angela.ubn0
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242
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Inserting "Biotype" into scater SCE objects
R scater sce biotype written 12 months ago by thebadpenny0 • updated 12 months ago by Aaron Lun23k
4
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3
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Warning: negative size factors
scran scater singlecellexperiment size factor negative written 12 months ago by Marina V.V.0 • updated 12 months ago by Aaron Lun23k
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421
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0
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273
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calculateQCmetrics doesn't accept `numeric` `feature_controls` in scater 1.6.2
scater written 13 months ago by Andrew_McDavid190 • updated 13 months ago by Aaron Lun23k
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2
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619
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error when installing beachmat
scater beachmat written 15 months ago by j.xu30 • updated 14 months ago by galib3610
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