Showing: scranreset
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k argument in buildSNNGraph
scran written 5 weeks ago by Angelos Armen0 • updated 5 weeks ago by Aaron Lun24k
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136
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Preprocessing in scran::doubletCells
scran simplesinglecell written 6 weeks ago by Angelos Armen0 • updated 6 weeks ago by Aaron Lun24k
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148
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4
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163
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scRNA-seq : Classification of cell cycle phase
scran scater written 11 weeks ago by Bogdan580 • updated 11 weeks ago by Aaron Lun24k
3
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194
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scRNA-seq : runPCA() and denoisePCA()
scran scater written 11 weeks ago by Bogdan580 • updated 11 weeks ago by Aaron Lun24k
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123
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number of cell clusters in scRNA-seq
scran scater sc3 written 11 weeks ago by Bogdan580 • updated 11 weeks ago by Aaron Lun24k
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137
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0
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90
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3
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103
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Is logFC a log2 fold change or some other base in scran::findMarkers
scran written 3 months ago by Chris Conley0 • updated 3 months ago by Aaron Lun24k
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217
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293
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200
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4
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175
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4
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215
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Using SC3 with batch corrected MNN values
scran scater sc3 scrna-seq batch correction written 5 months ago by hamza_karakurt30 • updated 5 months ago by Vladimir Kiselev150
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165
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normalization for infected homogenious cell populations
normalization single cell scran written 6 months ago by jcvera0 • updated 5 months ago by Aaron Lun24k
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172
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0
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1
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1
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215
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Dunn Index for Clusters from scRNA-Seq
clustering scran scater scrna-seq dunn index written 6 months ago by hamza_karakurt30 • updated 6 months ago by Aaron Lun24k
2
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210
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232
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2
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332
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Error in installation of scran
iranges genomicranges xvector s4vectors scran written 8 months ago by Momo0 • updated 8 months ago by Aaron Lun24k
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173
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scran/scater Normalized matrix
scran normalized counts scater written 8 months ago by Radek60 • updated 8 months ago by Aaron Lun24k
7
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280
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1
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1
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1
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228
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How to resolve these trendVar() warnings and errors
scran scater singlecellexperiment written 9 months ago by Abhishek Singh20 • updated 9 months ago by Aaron Lun24k
2
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446
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[MnnCorrect] Remove batch effects but keep condition effects
rnaseq scran single-cell mnncorrect written 9 months ago by John Reid10 • updated 9 months ago by Aaron Lun24k
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