Showing: scrna-seq • reset
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Dunn Index for Clusters from scRNA-Seq
clustering scran scater scrna-seq dunn index written 15 days ago by hamza_karakurt • 0 • updated 14 days ago by Aaron Lun • 23k
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Differential Expression Analysis between conditions of single cell RNA-Seq
deseq2 rna-seq scrna-seq differential expression analysis written 19 days ago by hamza_karakurt • 0 • updated 19 days ago by Michael Love ♦ 22k
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Modularity values of clusters and Differential Expression in scRNA-Seq
igraph scran scater scrna-seq rots written 26 days ago by hamza_karakurt • 0 • updated 25 days ago by Aaron Lun • 23k
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Enrichment Analysis with only GeneSymbols
R rna-seq gsea scrna-seq written 28 days ago by hamza_karakurt • 0 • updated 28 days ago by Peter Langfelder • 1.8k
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Adding labels on clusters in a t-SNE plot and changing colors
ggplot2 rtsne scran scater scrna-seq written 4 weeks ago by hamza_karakurt • 0 • updated 4 weeks ago by Aaron Lun • 23k
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Silhouette Plots for Clustering Quality (Multiple Algorithm)
clustering rna-seq scrna-seq silhouette plot written 7 weeks ago by hamza_karakurt • 0 • updated 6 weeks ago by Aaron Lun • 23k
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about scRNA-seq, SEURAT and CCA
scrna-seq written 9 weeks ago by Bogdan • 550 • updated 9 weeks ago by James W. MacDonald ♦ 49k
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gene counts in Seurat after RunCCA() and AlignSubspace()
seurat scrna-seq cca written 11 weeks ago by Bogdan • 550 • updated 11 weeks ago by Aaron Lun • 23k
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scRNA-seq: a question about the names of the columns in a Seurat object
seurat scrna-seq written 3 months ago by Bogdan • 550 • updated 3 months ago by Steve Lianoglou ♦ 12k
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single cell RNA-seq pipeline
rnaseq scrna-seq written 8 months ago by Bogdan • 550 • updated 8 months ago by Aaron Lun • 23k
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