3
votes
1
answer
273
views
1
answer
0
votes
1
answer
356
views
1
answer
injectSNPS only for common variants
snp snplocs written 15 months ago by arubio0 • updated 15 months ago by Robert Castelo2.1k
0
votes
1
answer
362
views
1
answer
SNPlocs package for dbSNP 135
cancer snplocs written 6.0 years ago by Hervé Pagès ♦♦ 13k • updated 2.5 years ago by genefan0
0
votes
3
answers
661
views
3
answers
dbSNP build for R package SNPlocs.Hsapiens.dbSNP.20080617
snp cancer snplocs written 8.7 years ago by Hervé Pagès ♦♦ 13k • updated 2.6 years ago by genefan0
1
vote
3
answers
927
views
3
answers
0
votes
2
answers
650
views
2
answers
using snpid2grange() and/or rsidsToGRanges() for rsid lists with missing
snplocs written 3.4 years ago by k.askland20 • updated 3.4 years ago by Vincent J. Carey, Jr.6.2k
0
votes
0
answers
498
views
0
answers
0
votes
2
answers
718
views
2
answers
minfi release 1.8
snp annotation go probe snplocs process minfi bumphunter champ written 4.1 years ago by Tim Triche4.2k • updated 4.0 years ago by Smeeta Shrestha10
0
votes
1
answer
586
views
1
answer
VCF as custom variant annotation database
annotation snplocs written 4.1 years ago by Lescai, Francesco370 • updated 4.1 years ago by Valerie Obenchain ♦♦ 6.4k
0
votes
1
answer
551
views
1
answer
0
votes
0
answers
951
views
0
answers
0
votes
0
answers
876
views
0
answers
0
votes
1
answer
270
views
1
answer
custom variant AnnotationDbi?
annotation snplocs written 4.4 years ago by Lescai, Francesco370 • updated 4.4 years ago by Vincent J. Carey, Jr.6.2k
0
votes
1
answer
626
views
1
answer
From location to get the SNP rs ID
snp cancer snplocs assign written 4.7 years ago by Fabrice Tourre950 • updated 4.7 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
647
views
1
answer
IlluminaHumanMethylation450kprobe for nearest TSS calculation question
annotation bsgenome snplocs written 5.0 years ago by Guest User12k • updated 5.0 years ago by Tim Triche4.2k
0
votes
1
answer
742
views
1
answer
0
votes
0
answers
397
views
0
answers
0
votes
1
answer
689
views
1
answer
predictCoding() return empty Granges
annotation cancer arabidopsis thaliana bsgenome snplocs transcriptdb written 5.4 years ago by sun100 • updated 5.4 years ago by Hervé Pagès ♦♦ 13k
0
votes
2
answers
546
views
2
answers
predictCoding() return empty Granges
annotation cancer arabidopsis thaliana bsgenome snplocs transcriptdb written 5.4 years ago by sun100 • updated 5.4 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
499
views
1
answer
GGtools: transScores function returning cis eQTL
snp annotation probe snplocs ggtools written 5.4 years ago by Guest User12k • updated 5.4 years ago by Vincent J. Carey, Jr.6.2k
0
votes
0
answers
437
views
0
answers
dbSNP strand information
snplocs safe written 6.0 years ago by Alex Gutteridge650
0
votes
1
answer
466
views
1
answer
Strand information for dbSNP packages
snplocs safe written 6.0 years ago by Alex Gutteridge650 • updated 6.0 years ago by Valerie Obenchain ♦♦ 6.4k
0
votes
2
answers
520
views
2
answers
Finding coding SNPs with predictCoding
snp variantannotation bsgenome snplocs written 6.0 years ago by Alex Gutteridge650 • updated 6.0 years ago by Valerie Obenchain ♦♦ 6.4k
0
votes
1
answer
657
views
1
answer
RE : maping SNPs
snp annotation cancer snplocs transcriptdb genomicfeatures genomicranges written 6.0 years ago by SimonNoël450 • updated 6.0 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
381
views
1
answer
custom SNPlocs / BSgenome package
snp annotation organism homo sapiens bsgenome snplocs written 6.2 years ago by km100 • updated 6.2 years ago by Hervé Pagès ♦♦ 13k
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