3
votes
1
answer
238
views
1
answer
0
votes
1
answer
311
views
1
answer
injectSNPS only for common variants
snp snplocs written 13 months ago by arubio0 • updated 13 months ago by Robert Castelo2.0k
0
votes
1
answer
348
views
1
answer
SNPlocs package for dbSNP 135
cancer snplocs written 5.8 years ago by Hervé Pagès ♦♦ 13k • updated 2.3 years ago by genefan0
0
votes
3
answers
610
views
3
answers
dbSNP build for R package SNPlocs.Hsapiens.dbSNP.20080617
snp cancer snplocs written 8.5 years ago by Hervé Pagès ♦♦ 13k • updated 2.4 years ago by genefan0
1
vote
3
answers
878
views
3
answers
0
votes
2
answers
637
views
2
answers
using snpid2grange() and/or rsidsToGRanges() for rsid lists with missing
snplocs written 3.2 years ago by k.askland20 • updated 3.2 years ago by Vincent J. Carey, Jr.6.2k
0
votes
0
answers
481
views
0
answers
0
votes
2
answers
674
views
2
answers
minfi release 1.8
snp annotation go probe snplocs process minfi bumphunter champ written 3.9 years ago by Tim Triche4.2k • updated 3.8 years ago by Smeeta Shrestha10
0
votes
1
answer
541
views
1
answer
VCF as custom variant annotation database
annotation snplocs written 3.9 years ago by Lescai, Francesco370 • updated 3.9 years ago by Valerie Obenchain ♦♦ 6.4k
0
votes
1
answer
523
views
1
answer
0
votes
0
answers
902
views
0
answers
0
votes
0
answers
840
views
0
answers
0
votes
1
answer
265
views
1
answer
custom variant AnnotationDbi?
annotation snplocs written 4.2 years ago by Lescai, Francesco370 • updated 4.2 years ago by Vincent J. Carey, Jr.6.2k
0
votes
1
answer
574
views
1
answer
From location to get the SNP rs ID
snp cancer snplocs assign written 4.5 years ago by Fabrice Tourre950 • updated 4.5 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
602
views
1
answer
IlluminaHumanMethylation450kprobe for nearest TSS calculation question
annotation bsgenome snplocs written 4.8 years ago by Guest User12k • updated 4.8 years ago by Tim Triche4.2k
0
votes
1
answer
659
views
1
answer
0
votes
0
answers
364
views
0
answers
0
votes
1
answer
632
views
1
answer
predictCoding() return empty Granges
annotation cancer arabidopsis thaliana bsgenome snplocs transcriptdb written 5.2 years ago by sun100 • updated 5.2 years ago by Hervé Pagès ♦♦ 13k
0
votes
2
answers
503
views
2
answers
predictCoding() return empty Granges
annotation cancer arabidopsis thaliana bsgenome snplocs transcriptdb written 5.2 years ago by sun100 • updated 5.2 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
470
views
1
answer
GGtools: transScores function returning cis eQTL
snp annotation probe snplocs ggtools written 5.2 years ago by Guest User12k • updated 5.2 years ago by Vincent J. Carey, Jr.6.2k
0
votes
0
answers
404
views
0
answers
dbSNP strand information
snplocs safe written 5.8 years ago by Alex Gutteridge650
0
votes
1
answer
425
views
1
answer
Strand information for dbSNP packages
snplocs safe written 5.8 years ago by Alex Gutteridge650 • updated 5.8 years ago by Valerie Obenchain ♦♦ 6.4k
0
votes
2
answers
486
views
2
answers
Finding coding SNPs with predictCoding
snp variantannotation bsgenome snplocs written 5.8 years ago by Alex Gutteridge650 • updated 5.8 years ago by Valerie Obenchain ♦♦ 6.4k
0
votes
1
answer
599
views
1
answer
RE : maping SNPs
snp annotation cancer snplocs transcriptdb genomicfeatures genomicranges written 5.8 years ago by SimonNoël450 • updated 5.8 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
363
views
1
answer
custom SNPlocs / BSgenome package
snp annotation organism homo sapiens bsgenome snplocs written 6.0 years ago by km100 • updated 6.0 years ago by Hervé Pagès ♦♦ 13k
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