0
votes
1
answer
166
views
1
answer
3.7 behaviour change with snplocs snpsById?
snplocs software error gpos written 7 months ago by j.abbott0 • updated 6 months ago by Hervé Pagès ♦♦ 13k
3
votes
1
answer
433
views
1
answer
0
votes
1
answer
506
views
1
answer
injectSNPS only for common variants
snp snplocs written 2.1 years ago by arubio0 • updated 2.1 years ago by Robert Castelo2.2k
0
votes
1
answer
462
views
1
answer
SNPlocs package for dbSNP 135
cancer snplocs written 6.8 years ago by Hervé Pagès ♦♦ 13k • updated 3.3 years ago by genefan0
0
votes
3
answers
817
views
3
answers
dbSNP build for R package SNPlocs.Hsapiens.dbSNP.20080617
snp cancer snplocs written 9.5 years ago by Hervé Pagès ♦♦ 13k • updated 3.4 years ago by genefan0
1
vote
3
answers
1.1k
views
3
answers
0
votes
2
answers
746
views
2
answers
using snpid2grange() and/or rsidsToGRanges() for rsid lists with missing
snplocs written 4.2 years ago by k.askland20 • updated 4.2 years ago by Vincent J. Carey, Jr.6.2k
0
votes
0
answers
587
views
0
answers
0
votes
2
answers
856
views
2
answers
minfi release 1.8
snp annotation go probe snplocs process minfi bumphunter champ written 4.9 years ago by Tim Triche4.2k • updated 4.8 years ago by Smeeta Shrestha20
0
votes
1
answer
718
views
1
answer
VCF as custom variant annotation database
annotation snplocs written 4.9 years ago by Lescai, Francesco380 • updated 4.9 years ago by Valerie Obenchain ♦♦ 6.7k
0
votes
1
answer
652
views
1
answer
0
votes
0
answers
1.1k
views
0
answers
0
votes
0
answers
1.0k
views
0
answers
0
votes
1
answer
363
views
1
answer
custom variant AnnotationDbi?
annotation snplocs written 5.2 years ago by Lescai, Francesco380 • updated 5.2 years ago by Vincent J. Carey, Jr.6.2k
0
votes
1
answer
874
views
1
answer
From location to get the SNP rs ID
snp cancer snplocs assign written 5.5 years ago by Fabrice Tourre970 • updated 5.5 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
821
views
1
answer
IlluminaHumanMethylation450kprobe for nearest TSS calculation question
annotation bsgenome snplocs written 5.8 years ago by Guest User12k • updated 5.8 years ago by Tim Triche4.2k
0
votes
1
answer
909
views
1
answer
0
votes
0
answers
486
views
0
answers
0
votes
1
answer
905
views
1
answer
predictCoding() return empty Granges
annotation cancer arabidopsis thaliana bsgenome snplocs transcriptdb written 6.2 years ago by sun100 • updated 6.2 years ago by Hervé Pagès ♦♦ 13k
0
votes
2
answers
706
views
2
answers
predictCoding() return empty Granges
annotation cancer arabidopsis thaliana bsgenome snplocs transcriptdb written 6.2 years ago by sun100 • updated 6.2 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
639
views
1
answer
GGtools: transScores function returning cis eQTL
snp annotation probe snplocs ggtools written 6.2 years ago by Guest User12k • updated 6.2 years ago by Vincent J. Carey, Jr.6.2k
0
votes
0
answers
586
views
0
answers
dbSNP strand information
snplocs safe written 6.8 years ago by Alex Gutteridge650
0
votes
1
answer
575
views
1
answer
Strand information for dbSNP packages
snplocs safe written 6.8 years ago by Alex Gutteridge650 • updated 6.8 years ago by Valerie Obenchain ♦♦ 6.7k
0
votes
2
answers
648
views
2
answers
Finding coding SNPs with predictCoding
snp variantannotation bsgenome snplocs written 6.8 years ago by Alex Gutteridge650 • updated 6.8 years ago by Valerie Obenchain ♦♦ 6.7k
0
votes
1
answer
828
views
1
answer
RE : maping SNPs
snp annotation cancer snplocs transcriptdb genomicfeatures genomicranges written 6.8 years ago by SimonNoël450 • updated 6.8 years ago by Hervé Pagès ♦♦ 13k
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