1
vote
0
answers
43
views
0
answers
2
votes
3
answers
67
views
3
answers
0
votes
1
answer
100
views
1
answer
RNA-Seq Batch correction negative values
sva combat rna-seq scran batch-effect written 21 days ago by rmf0 • updated 21 days ago by Aaron Lun16k
0
votes
1
answer
67
views
1
answer
Retrieving corrected matrix after linear model adjustment
limma sva written 21 days ago by ahmed.asadik0 • updated 21 days ago by James W. MacDonald44k
2
votes
1
answer
120
views
1
answer
Error in the fsva function after setting "newdat" argument to NULL
sva written 4 months ago by zicheng.hu20 • updated 8 weeks ago by victor.2wy0
0
votes
0
answers
360
views
0
answers
1
vote
1
answer
463
views
1
answer
0
votes
0
answers
499
views
0
answers
1
vote
1
answer
589
views
1
answer
normalization affects drastically limma-voom + sva results
normalization sva limma-voom written 12 weeks ago by aec30 • updated 12 weeks ago by Gordon Smyth31k
0
votes
1
answer
603
views
1
answer
Applying sva is compatible with limma duplicateCorrelation?
sva duplicatecorrelation limma-voom written 12 weeks ago by aec30 • updated 12 weeks ago by sina.nassiri50
0
votes
0
answers
97
views
0
answers
1
vote
0
answers
130
views
0
answers
3
votes
1
answer
175
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 4 months ago by wamiqsaifi0 • updated 4 months ago by Guido Hooiveld2.1k
0
votes
0
answers
167
views
0
answers
0
votes
0
answers
113
views
0
answers
0
votes
0
answers
144
views
0
answers
0
votes
1
answer
214
views
1
answer
2
votes
1
answer
250
views
1
answer
SVA package - ERROR: nvobj = sva(edata, mod, mod0, n.sv=n.sv)
sva R removebatcheffect written 5 months ago by aina.jene10 • updated 5 months ago by sina.nassiri50
0
votes
1
answer
256
views
1
answer
3
votes
1
answer
212
views
1
answer
2
votes
1
answer
332
views
1
answer
1
vote
1
answer
136
views
1
answer
How to interpret the SVA results
sva combat rna-seq written 6 months ago by xie1860 • updated 6 months ago by James W. MacDonald44k
1
vote
1
answer
260
views
1
answer
Using SVA with RRBS data
sva rrbs written 7 months ago by mrodrigues.fernanda10 • updated 7 months ago by Jeff Leek490
0
votes
0
answers
192
views
0
answers
4
votes
1
answer
224
views
1
answer
Adjust for multiple batches using combat
limma sva combat written 7 months ago by juls0 • updated 7 months ago by Aaron Lun16k
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