Showing: svareset
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Using surrogate variables as covariates in WGBS differential methylation calling
sva dss dmrseq written 5 weeks ago by gjl0 • updated 4 weeks ago by keegan60
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removing batch effect using DESeq and sva
sva deseq2 heatmap batch effect pca written 5 weeks ago by bioyas0 • updated 5 weeks ago by Michael Love24k
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DESeq2, how to deal with batch effect: t-test or design matrix?
sva deseq2 design matrix batch t-test written 11 weeks ago by Mozart10 • updated 11 weeks ago by Michael Love24k
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svaseq - over adjustment
sva svaseq written 3 months ago by flippy230
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Computationally Singular Matrices - DESeq
rnaseq sva deseq2 written 3 months ago by flippy230 • updated 3 months ago by Michael Love24k
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Normalized transcript/exon counts for network analysis
dexseq sva wgcna drimseq written 5 months ago by maya.kappil10 • updated 4 months ago by Gosia Nowicka40
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[sva] Error in density.default(x, adjust = adj) : 'x' contains missing values
sva written 21 months ago by anton.kratz50 • updated 5 months ago by Benjamin_2013140
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sva correction for MEDIPS
medips sva svaseq written 5 months ago by tofukaj0 • updated 5 months ago by Lukas Chavez510
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paired sample - SVA model matrix
limma sva paired sample written 7 months ago by flippy230 • updated 7 months ago by James W. MacDonald50k
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SVAseq and DESeq2 workflow
sva deseq2 written 9 months ago by capricygcapricyg0 • updated 9 months ago by Michael Love24k
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Sva for tumor cellular heterogeneity
limma sva written 9 months ago by chp9500
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A problem in using Combat
sva combat written 13 months ago by linw0 • updated 12 months ago by W. Evan Johnson800
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Calling svaseq() multiple times
limma edger sva svaseq written 14 months ago by cats_dogs20 • updated 14 months ago by Ryan C. Thompson7.3k
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What does this error mean? - issue implementing SVA
sva rna-seq written 3.4 years ago by kmuench30 • updated 15 months ago by Sandip Darji10
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