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83
views
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answers
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vote
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answer
165
views
1
answer
0
votes
0
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220
views
0
answers
1
vote
1
answer
305
views
1
answer
normalization affects drastically limma-voom + sva results
normalization sva limma-voom written 26 days ago by aec30 • updated 26 days ago by Gordon Smyth31k
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1
answer
303
views
1
answer
0
votes
0
answers
64
views
0
answers
1
vote
0
answers
78
views
0
answers
3
votes
1
answer
111
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 9 weeks ago by wamiqsaifi0 • updated 9 weeks ago by Guido Hooiveld2.1k
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0
answers
74
views
0
answers
0
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0
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113
views
0
answers
0
votes
0
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94
views
0
answers
0
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0
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118
views
0
answers
0
votes
1
answer
165
views
1
answer
2
votes
1
answer
178
views
1
answer
SVA package - ERROR: nvobj = sva(edata, mod, mod0, n.sv=n.sv)
sva R removebatcheffect written 3 months ago by aina.jene10 • updated 3 months ago by sina.nassiri40
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1
answer
195
views
1
answer
3
votes
1
answer
174
views
1
answer
2
votes
1
answer
261
views
1
answer
1
vote
1
answer
111
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1
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How to interpret the SVA results
sva combat rna-seq written 4 months ago by xie186bioinforcore0 • updated 4 months ago by James W. MacDonald44k
1
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1
answer
221
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1
answer
Using SVA with RRBS data
sva rrbs written 5 months ago by mrodrigues.fernanda10 • updated 5 months ago by Jeff Leek480
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0
answers
142
views
0
answers
4
votes
1
answer
185
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1
answer
Adjust for multiple batches using combat
limma sva combat written 5 months ago by juls0 • updated 5 months ago by Aaron Lun15k
3
votes
1
answer
287
views
1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 5 months ago by Bogdan470 • updated 5 months ago by Aaron Lun15k
3
votes
1
answer
284
views
1
answer
How to normalize chromatin and RNA-Seq data together ?
sva deseq2 combat atac atac-seq written 5 months ago by g.atla0 • updated 5 months ago by Michael Love13k
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0
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173
views
0
answers
0
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1
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170
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1
answer
sva: Parallel execution of sva()-function fails.
sva parallel written 6 months ago by maltethodberg30 • updated 6 months ago by Martin Morgan ♦♦ 20k
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