Showing: transcriptdbreset
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'version' is missing error when running makeTxDbPackageFromUCSC
cancer transcriptdb iranges genomicfeatures written 5.6 years ago by Hervé Pagès ♦♦ 13k • updated 3.5 years ago by dave10
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Get sequences for GRCh38 genome based on TxDb object locations
bsgenome transcriptdb genomeinfodb written 4.3 years ago by Diego Diez730 • updated 4.3 years ago by Hervé Pagès ♦♦ 13k
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BugReports: bug with runValue (strand (GRangesList))
transcriptdb written 4.4 years ago by Robert K. Bradley40 • updated 4.4 years ago by Hervé Pagès ♦♦ 13k
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Genomic Features - makeTranscriptDbFromGFF()
organism transcriptdb genomicfeatures written 4.8 years ago by Guest User12k • updated 4.8 years ago by Marc Carlson7.2k
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876
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ggbio 1.12.0 autoplot() with txdb example is broken
transcriptdb written 5.0 years ago by Leonardo Collado Torres610 • updated 5.0 years ago by Tengfei Yin490
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871
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Extracting strand information from GenomicFeatures transcript db objects
transcriptdb biomart written 5.1 years ago by Veerendra GP100 • updated 5.1 years ago by Hervé Pagès ♦♦ 13k
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967
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Error in combining GRanges objects into GRangesList object
transcriptdb written 5.2 years ago by Kalyan K Pasumarthy10 • updated 5.2 years ago by Michael Lawrence10k
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makeTranscriptDbFromUCSC
transcriptdb written 5.3 years ago by Georg Otto120
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autoplot() error on a GRanges object in ggbio 1.10.8
annotation transcriptdb written 5.4 years ago by Leonardo Collado Torres610 • updated 5.4 years ago by Tengfei Yin490
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756
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autoplot transcriptDb error with some regions
transcriptdb biovizbase ggbio written 5.5 years ago by Malcolm Cook1.5k • updated 5.5 years ago by Tengfei Yin490
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Working with ensembl 73 & BSGenome
annotation bsgenome transcriptdb biomart written 5.5 years ago by Guest User12k • updated 5.5 years ago by Hervé Pagès ♦♦ 13k
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869
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makeTranscriptDbFromGFF fails on NCBI Bacteria genomes
go transcriptdb goseq genomes written 5.5 years ago by 刘鹏飞80 • updated 5.5 years ago by Marc Carlson7.2k
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autoplot transcriptDb error with some regions
transcriptdb ggbio written 5.5 years ago by Alejandro Reyes1.6k • updated 5.5 years ago by Tengfei Yin490
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721
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GenomicFeatures- disjointExons error
transcriptdb written 5.5 years ago by Julie Zhu4.0k • updated 5.5 years ago by Hervé Pagès ♦♦ 13k
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'version' is missing error when running makeTxDbPackageFromUCSC
transcriptdb iranges written 5.6 years ago by Michael Steeves40 • updated 5.7 years ago by Dan Tenenbaum8.2k
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