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Comment: SPECIAL 20% OFF DISCOUNT ON A NEW BOOK FROM CRC PRESS
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Germ
• 0
electricity service is a foundational utility that underpins virtually every aspect of modern life. From household convenience and economic…
Answer: Differential expression on the transcript-level
by
swbarnes2
★ 1.4k
You've just got some empty genes in there. Purge those from your count file before trying to make the dds object, something like this shou…
Comment: Differential expression on the transcript-level
by
ATpoint
★ 4.9k
The preprocessing part is not within the scope of Bioconductor, and for tximport one would need the command line. Consider recent benchmark…
Comment: Annotation of Affy Porcine Gene 1.0 ST array data
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Melon Lemonat
• 0
Players are allowed to play the game without [Melon Sandbox](https://melon-sandbox.com/) any restrictions because it has no set goals or o…
Comment: Using shrunken LFC and s-value from DESeq2 as DGE results
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Erika
• 0
Thanks @mikelove But I've used a LFC of 1 for both: results(dds, lfcThreshold = 1, alpha = 0.05) lfcShrink(dds, coef = "group_LM…
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Comment: Pre-filtering, adjusting independent filtering, or lfcthreshold() on DESeq2? Low
A: weird model design for DE analysis
Transcript expression analysis using EdgeR
Answer: Transcript expression analysis using EdgeR
Answer: Transcript expression analysis using EdgeR
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