0
votes
2
answers
99
views
2
answers
Data from ##SAMPLE lines in VCF?
variantannotation coldata written 22 days ago by lvclark0 • updated 15 days ago by Valerie Obenchain ♦♦ 6.6k
3
votes
1
answer
133
views
1
answer
3
votes
1
answer
90
views
1
answer
Problem when transforming Platypus vcf to VRanges
variantannotation vcf readvcf vranges written 3 months ago by david.mas0 • updated 3 months ago by Michael Lawrence10k
0
votes
1
answer
100
views
1
answer
Error: invalid class "VRanges" object
variantannotation R rle vranges written 3 months ago by Jayendra Shinde0 • updated 3 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
106
views
1
answer
0
votes
1
answer
116
views
1
answer
filtering a VCF file based on genotype
variantannotation written 5 months ago by Bogdan520 • updated 5 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
0
answers
115
views
0
answers
0
votes
0
answers
164
views
0
answers
2
votes
1
answer
221
views
1
answer
0
votes
1
answer
786
views
1
answer
Problem using biocLite() to update packages
variantannotation biocinstaller bioclite written 11 months ago by Jenny Drnevich1.9k • updated 11 months ago by James W. MacDonald48k
0
votes
0
answers
231
views
0
answers
6
votes
2
answers
582
views
2
answers
BiocGenerics built with R 3.4.2 changes behaviour
variantannotation iranges biocgenerics written 12 months ago by ginggs30 • updated 12 months ago by Hervé Pagès ♦♦ 13k
7
votes
2
answers
468
views
2
answers
SNP location annotation problem in "VariantAnnotation" package
variantannotation annotation written 13 months ago by yduan00420 • updated 13 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
465
views
1
answer
Translation Error in predictCoding() for VariantAnnotation
variantannotation written 13 months ago by creasyt0 • updated 13 months ago by Hervé Pagès ♦♦ 13k
7
votes
2
answers
518
views
2
answers
0
votes
2
answers
523
views
2
answers
0
votes
0
answers
457
views
0
answers
2
votes
1
answer
723
views
1
answer
0
votes
1
answer
315
views
1
answer
0
votes
1
answer
254
views
1
answer
3
votes
2
answers
327
views
2
answers
No annotation for single SNPs
variantannotation snps ucsc txdb.hsapiens.ucsc.hg19.knowngene written 16 months ago by Lna0 • updated 16 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
427
views
1
answer
Error using readVcf
variantannotation gwastools written 16 months ago by Lna0 • updated 16 months ago by Stephanie M. Gogarten560
3
votes
1
answer
463
views
1
answer
VariantAnnotation Installation Failure
variantannotation written 17 months ago by andrew.j.skelton73310 • updated 16 months ago by Valerie Obenchain ♦♦ 6.6k
1
vote
1
answer
306
views
1
answer
Exclude Mutations from Mutation List
variantannotation written 17 months ago by Haiying.Kong100 • updated 17 months ago by Martin Morgan ♦♦ 22k
2
votes
1
answer
488
views
1
answer
extracting Allele Read Counts - part2
variantannotation rsamtools written 18 months ago by Bogdan520 • updated 18 months ago by James W. MacDonald48k
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