3
votes
1
answer
94
views
1
answer
3
votes
1
answer
55
views
1
answer
Problem when transforming Platypus vcf to VRanges
variantannotation vcf readvcf vranges written 6 weeks ago by david.mas0 • updated 6 weeks ago by Michael Lawrence10k
0
votes
1
answer
62
views
1
answer
Error: invalid class "VRanges" object
variantannotation R rle vranges written 8 weeks ago by Jayendra Shinde0 • updated 7 weeks ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
75
views
1
answer
0
votes
1
answer
94
views
1
answer
filtering a VCF file based on genotype
variantannotation written 3 months ago by Bogdan490 • updated 3 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
0
answers
79
views
0
answers
0
votes
0
answers
129
views
0
answers
2
votes
1
answer
191
views
1
answer
0
votes
1
answer
660
views
1
answer
Problem using biocLite() to update packages
variantannotation biocinstaller bioclite written 9 months ago by Jenny Drnevich1.9k • updated 9 months ago by James W. MacDonald47k
0
votes
0
answers
198
views
0
answers
6
votes
2
answers
533
views
2
answers
BiocGenerics built with R 3.4.2 changes behaviour
variantannotation iranges biocgenerics written 10 months ago by ginggs30 • updated 10 months ago by Hervé Pagès ♦♦ 13k
5
votes
2
answers
413
views
2
answers
SNP location annotation problem in "VariantAnnotation" package
variantannotation annotation written 11 months ago by yduan00420 • updated 11 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
429
views
1
answer
Translation Error in predictCoding() for VariantAnnotation
variantannotation written 11 months ago by creasyt0 • updated 11 months ago by Hervé Pagès ♦♦ 13k
7
votes
2
answers
469
views
2
answers
0
votes
2
answers
496
views
2
answers
0
votes
0
answers
420
views
0
answers
2
votes
1
answer
683
views
1
answer
0
votes
1
answer
288
views
1
answer
0
votes
1
answer
234
views
1
answer
3
votes
2
answers
298
views
2
answers
No annotation for single SNPs
variantannotation snps ucsc txdb.hsapiens.ucsc.hg19.knowngene written 14 months ago by Lna0 • updated 14 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
379
views
1
answer
Error using readVcf
variantannotation gwastools written 14 months ago by Lna0 • updated 14 months ago by Stephanie M. Gogarten560
3
votes
1
answer
384
views
1
answer
VariantAnnotation Installation Failure
variantannotation written 15 months ago by andrew.j.skelton73310 • updated 14 months ago by Valerie Obenchain ♦♦ 6.6k
1
vote
1
answer
285
views
1
answer
Exclude Mutations from Mutation List
variantannotation written 15 months ago by Haiying.Kong100 • updated 15 months ago by Martin Morgan ♦♦ 22k
2
votes
1
answer
421
views
1
answer
extracting Allele Read Counts - part2
variantannotation rsamtools written 16 months ago by Bogdan490 • updated 16 months ago by James W. MacDonald47k
0
votes
1
answer
428
views
1
answer
Error in c(DataFrameList(META = meta), tbls[unique(tags)])
variantannotation written 16 months ago by ddzhangzz0 • updated 16 months ago by Hervé Pagès ♦♦ 13k
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