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Comment: How to figure out the FC value from Limma by beslinail • 0
Thanks alot for the feedback. I also read the file.tsv in R but logFC 246.249.360.536.749 282.311.618.510.231 624.874.186.717.992 610.289…
Comment: Limma for paired and unpaired samples. Strange number of DEGs in unpaired sample by ATpoint ★ 1.2k
Cross-posted and answered by @gordonsmyth https://www.biostars.org/p/9524346/
Comment: Module membership vs gene significance result and Modules-trait relationships re by annamariabugaj ▴ 10
similar problem here, my detailed question is here: https://support.bioconductor.org/p/133024/#9144455
Comment: Calculation of module membership in WGCNA by annamariabugaj ▴ 10
I have a question regarding the Gene Significance since I am very confused with my results. In the module-trait correlation heatmap, the …
Comment: regression analysis for epic array methylation data using limma by Basti ▴ 280
Your DMPs can be accessed with topTable function : `DMPs <- topTable(fit2, coef=2)`, then you can filter the DMPs by adjusted P-val
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Comment: Question on RNA-Seq single sample data analysis in EdgeR
Answer: Question on RNA-Seq single sample data analysis in EdgeR
Answer: Question on RNA-Seq single sample data analysis in EdgeR
Answer: How to run GSVA with partially NA genes
Answer: How to run GSVA with partially NA genes
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