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Answer: Struggle with the replicates of epic array data
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James W. MacDonald
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You shouldn't be using beta values for a linear model that assumes a unimodal, untruncated distribution (beta values are strictly on (0-1) …
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Robert Castelo
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So, if I understand correctly, you derived GSVA scores from gene sets corresponding somehow to drugs in your RNA-seq data. Since GSVA score…
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> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively?
Read over the vignette and work…
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Gordon Smyth
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You need to clarify whether interactions are present for the two factors in your study.
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GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
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