Bioconductor ChipSeq

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1.2k

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ChIPpeakAnno ChIPSeq

updated 8 months ago by James W. MacDonald 65k • written 9 months ago by Jerina ▴ 10

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1.9k

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DiffBind R chipseq

updated 5 months ago by Rory Stark ★ 5.2k • written 6.6 years ago by kyliecode • 0

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472

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DiffBind chipseq

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by lin.pei26 • 0

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428

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chipseq DifferentialMethylation DESeq2

updated 3 months ago by Michael Love 42k • written 3 months ago by rebw25 • 0

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1.1k

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ChIPSeq DiffBind

updated 11 months ago by Rory Stark ★ 5.2k • written 12 months ago by lin.pei26 • 0

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137

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chipseq

updated 4 weeks ago by James W. MacDonald 65k • written 4 weeks ago by zhulin • 0

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351

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csaw ChIPseq DiffBind

6 months ago jared.andrews07 ▴ 30

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3.2k

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DiffBind chipseq

updated 9 months ago by Rory Stark ★ 5.2k • written 9 months ago by ANAMIKA • 0

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299

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ChIPpeakAnno ChIPSeq MotifDiscovery

7 months ago franciscrick41 • 0

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DiffBind macs2 chipseq

17 days ago yvonneh • 0

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197

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ChIPSeq annotation ChIPpeakAnno

3 months ago nilanjanamani88 • 0

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193

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bSubControl ChIPSeq DiffBind

4 months ago frueher • 0

12 results • Page 1 of 1

Recent ...

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Comment: all variables in design formula must be columns in colData (Deseq2) error by Galina • 0

thank you!

Comment: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k

coldata_rat <- data.frame(conditions=..., batch=...)

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by robersy • 0

Thank you all for your comments. I will follow your suggestions.

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…

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biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

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