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GeneMeta
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Missing values - metaArray, GeneMeta, RankProd, metahdep
RankProd
GeneMeta
metaArray
RankProd
GeneMeta
metaArray
12.8 years ago • updated 12.7 years ago
boczniak767
▴ 720
0
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6
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1.5k
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Combining two datasets - help to use GeneMeta.
rae230a
affy
GeneMeta
rae230a
affy
GeneMeta
updated 17.9 years ago by
Darlene Goldstein
▴ 230 • written 17.9 years ago by
Sharon Anbu
▴ 480
5
votes
4
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1.7k
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meta analysis of microarrays of small sample sizes
preprocessing
microarray
genemeta
updated 7.6 years ago by
alexvpickering
▴ 110 • written 7.6 years ago by
Lian Liu
▴ 20
0
votes
0
replies
309
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H bond prediction of two sequences
GeneMeta
generegulation
19 months ago
Marcus
• 0
0
votes
0
replies
924
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Obtaining unadjusted permutation p-value from GeneMeta package
GeneMeta
GeneMeta
13.5 years ago
Seungwoo Hwang
▴ 80
0
votes
0
replies
1.1k
views
GeneMeta for 2 color microarray
Microarray
limma
GeneMeta
Microarray
limma
GeneMeta
14.1 years ago
Paul Leo
▴ 970
0
votes
0
replies
790
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question about the GeneMeta package
GeneMeta
GeneMeta
18.8 years ago
ivan.borozan@utoronto.ca
▴ 80
7 results • Page
1 of 1
Recent ...
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Comment: Cannot connect to ExperimentHub server
by
Jiayu
• 0
Many thanks and it also resolved the same issue for me!
Comment: Help with running egsea()
by
Chris
• 0
I tried egsea.ma and got this error: gsa = egsea.ma(numeric_matrix, vector_group, probe_annotation, contrasts = contrast_matrix, gs.an…
Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
angelathuynh5
• 0
Thank you for your response. To clarify, the process of making a heatmap performs rowscaling so it takes the value - (mean/std). And to res…
Comment: Method to find pathways different between 2 groups
by
Gordon Smyth
50k
sigPathway is another method that does not account for inter-gene correlation and which gives inflated significance, as we showed in our 20…
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
by
James W. MacDonald
65k
I doubt you have that many contrasts. I think that is probably the number of rows. What does `dim(fit)` return (and `head(fit$coef)`)?
Votes
Answer: Cannot connect to ExperimentHub server
Answer: confused with tximport counts abundance using salmon input
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
Answer: Extremely small p-values using Limma for proteomic data
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