Showing : Hub gene • reset
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Calculation of module membership in WGCNA
WGCNA RNA-seq ModuleMembership Network Hub gene
updated 1 day ago by ▴ 10 • written 21 months ago by ▴ 50
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Comment: CPM after RUVseq by Jess • 0
Thank you, it was!
Answer: unable to install RBGL by James W. MacDonald 59k
That might have been transitory. If you try again, does it work, or is it consistent?
Comment: error with: .make_splicings <- function(exons, cds, stop_codons=NULL) by James W. MacDonald 59k
It's not clear from this what the problem is. Rather than running under `snakemake` you might run the R code directly. I mean it's obvious …
Comment: CPM after RUVseq by James W. MacDonald 59k
I am unfamiliar with a `counts` function (your `counts(set)`), so it's not clear what exactly you are putting into that `DGEList`. But if i…
Comment: error with: .make_splicings <- function(exons, cds, stop_codons=NULL) by rsnorman • 0
Thanks for the advice! I need to use this particular bacterial strain, but I did locate a more recent annotation for it and that cleared th…
Votes
Comment: CPM after RUVseq
A: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
Answer: CPM after RUVseq
Comment: Merging two plated in R
Answer: Merging two plated in R
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