Showing : SpatialDatasets • reset
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Job: Postdoctoral fellowships in Spatial Omics and Single Cell Genomics at the University of Padova (IT)
SingleCell Transcriptomics SpatialDatasets SpatialData
7 months ago Silvio • 0
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Comment: Diffbind interpretation of data - fold change by Vera • 0
Thank you for confirming that the foldchange is log2
Comment: Diffbind interpretation of data - fold change by Vera • 0
This solved it!
Comment: Diffbind interpretation of data - fold change by Vera • 0
Perfect! Thank you so much!
Answer: Diffbind interpretation of data - fold change by Rory Stark ★ 5.2k
For Question #2, note that by default, `dba.report()` only returns "differentially bound" intervals where the FDR is less than a threshold …
Comment: DESEQ2 Default Value for Cooks Distance cutoff by Michael Love 43k
You can set the cutoff manually. Yes, a lower value is more stringent.
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Answer: Package `not available for Bioconductor version '3.20'` when it should be
Comment: How do I fix an odd voom plot in a combined dataset?
Comment: How do I fix an odd voom plot in a combined dataset?
Comment: Theoretical WGCNA Question
Answer: Is it possible to work with DESeq2 where data is not properly matched for sex a
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