Bioconductor SupportSite

Showing : SupportSite • reset

10

votes

2

replies

933

views

SupportSite

updated 3.6 years ago by Steve Lianoglou ★ 13k • written 3.6 years ago by shepherl 3.9k

2

votes

1

reply

295

views

Bioconductor Website SupportSite

updated 3 months ago by Lori • 0 • written 4 months ago by shepherl 3.9k

2 results • Page 1 of 1

Recent ...

Replies

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0

The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.

Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Votes

Rsubread counting peaks ATACseq

Awards • All

Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180