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21.2 years ago • updated 10 months ago
Gordon Smyth
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Recent ...
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Comment: Memory errors using read.bismark?
by
Peter Hickey
▴
690
If you process serially (i.e. with `BPPARAM = SerialParam()`) then you might be okay.
The final object will be on the order of 250 GB in-me…
Answer: blockwiseModule crashes in the end and doesn't generate modules
by
xaweh28128
•
0
Test your word skills and see if you can crack the code in today's Wordle puzzle. [Nytimes wordle](https://wordlenytimes.net/quordle-game/)…
Comment: Memory errors using read.bismark?
by
Juan Higareda
•
0
Thanks for the answer. Actually, processing one file and keeping it in memory wasn't the problem, is more processing all the 15 files to bu…
Answer: Differentially expressed genes in monocle pseudotime
by
Gordon Smyth
50k
You might try the methods in this paper:
Cheng J, Smyth GK*, Chen Y* (2023). Unraveling the timeline of gene expression: A pseudotempora…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
•
0
Thank you Michael for your attention to my question. I am truly grateful.
I subsetted the data using lines of codes to include only the g…
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