Showing : TopGO • reset
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Question about 'annFUN.db' in topGO ....
GO probe topGO GO probe topGO
updated 17.4 years ago by ▴ 730 • written 17.4 years ago by ▴ 170
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new topGO results using GO.db very different from old ones using GO
GO annotate topGO BRAIN GO annotate topGO BRAIN
updated 17.6 years ago by ▴ 400 • written 17.6 years ago by ▴ 730
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topGO and GOstats conflict
GO GOstats topGO GO GOstats topGO
17.7 years ago Adrian Alexa ▴ 400
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topGO enrichment using ensembl gene list
Microarray Annotation GO PROcess globaltest topGO Microarray Annotation GO PROcess topGO
17.7 years ago Adrian Alexa ▴ 400
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topGO enrichment using ensembl gene list
Microarray GO topGO Microarray GO topGO
updated 17.7 years ago by 68k • written 17.7 years ago by ▴ 90
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topGO and GOstats conflict
GO GOstats topGO GO GOstats topGO
17.7 years ago Dick Beyer ★ 1.4k
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GO-Analysis using TopGO for Yeast2 data
Annotation GO yeast2 probe topGO Annotation GO yeast2 probe topGO
updated 17.7 years ago by ★ 7.2k • written 17.7 years ago by ▴ 10
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how can I use the limma result as input in topGo
GO limma topGO GO limma topGO
updated 18.1 years ago by ▴ 400 • written 18.1 years ago by ▴ 40
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Input for KS test
Genetics GO GOstats Category topGO Genetics GO GOstats Category topGO
18.4 years ago Ken Termiso ▴ 250
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goTools: ontoCompare question
GO topGO GO topGO
updated 18.5 years ago by ▴ 500 • written 18.5 years ago by ▴ 140
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GOstats, geneCounts and gene universe filtering...
GO rat2302 probe GOstats topGO GO rat2302 probe GOstats topGO
updated 18.6 years ago by ★ 7.4k • written 18.6 years ago by ▴ 110
211 results • Page 5 of 5
Recent ...
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Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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