Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
aldex2
•
reset
0
votes
0
replies
1.1k
views
Model matrix for a complex study design using aldex.glm module from ALDEx2 R package
ALDEx2
modelmatrix
covariates
2.4 years ago
amir
• 0
0
votes
3
replies
3.3k
views
How to correctly interpret ALDEx2 output - differential abundance testing
MicrobiomeData
ALDEx2
updated 2.6 years ago by
Lucie
• 0 • written 3.0 years ago by
RvH
• 0
0
votes
0
replies
1.0k
views
ALDEx2 Error Message: "dim(X) must have a positive length" when using aldex.clr() with denom="iqlr"
Metagenomics
IQLR
ALDEx2
2.9 years ago
cwarden45
• 0
1
vote
4
replies
2.0k
views
How to create an aldex.clr object from a "selex" data table
ALDEx2
3.4 years ago
Greg
• 0
0
votes
0
replies
970
views
Aldex2 BioCParallel issues
aldex2
updated 6.4 years ago by
Martin Morgan
25k • written 6.4 years ago by
jc235601
▴ 20
2
votes
0
replies
1.2k
views
Aldex2 error following tutorial - complex study design
software error
aldex2
6.4 years ago
mstagliamonte
▴ 10
0
votes
0
replies
1.3k
views
Aldex2 feature request - controlling for additional variables
ALDEx2
ALDEx
microbiome
16s
6.9 years ago
mstagliamonte
▴ 10
7 results • Page
1 of 1
Recent ...
Replies
Comment: upstream git branches of bioc-release
by
TrentonCollier99
• 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
by
Ahmed Salah
• 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR
by
JKim
• 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Comment: upstream git branches of bioc-release
by
Jeroen
▴ 10
OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.
Comment: Large logFC but somewhat high FDR
by
Gordon Smyth
53k
I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```
Votes
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Awards
• All
Popular Question
to
Gordon Smyth
53k
Popular Question
to
shepherl
4.2k
Popular Question
to
story.benjamin
▴ 20
Supporter
to
fabio.marroni
• 0
Popular Question
to
Guido Hooiveld
★ 4.1k
Locations
• All
WEHI, Melbourne, Australia,
1 hour ago
The city by the bay,
1 hour ago
United States,
2 hours ago
United States,
3 hours ago
Australia,
3 hours ago
Traffic: 903 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6