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MicrobiomeData
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Species level information couldn't find with DADA2 bioconductor package
Metagenomics
dada2
MicrobiomeData
written 20 months ago by
abhisek001
• 0
0
votes
3
replies
3.7k
views
How to correctly interpret ALDEx2 output - differential abundance testing
MicrobiomeData
ALDEx2
updated 2.9 years ago by
Lucie
• 0 • written 3.2 years ago by
RvH
• 0
1
vote
2
replies
1.8k
views
Query regarding error in installation of "microbiomeutilities" R package
MicrobiomeData
R
microbiomeutilities
Install
3.0 years ago
abhisek001
• 0
1
vote
0
replies
1.0k
views
News:
Virtual talk “Model Misspecification in Microbiome Studies” by Amy D Willis
MicrobiomeData
Microbiome
3.2 years ago
Levi Waldron
★ 1.1k
2
votes
2
replies
1.4k
views
HMP1-II Metagenomic Data
MicrobiomeData
curatedMetagenomicData
3.2 years ago
Pauline
▴ 20
0
votes
0
replies
1.4k
views
WCGNA: Using Eigengenes when correlating modules to external features? What about PC2, PC3???
Network
Transcriptomics
MicrobiomeData
RNASEQ
WCGNA
3.4 years ago
Julieta
• 0
0
votes
1
reply
1.6k
views
Editing Plots Generated Using MicrobiomeAnalyst
MicrobiomeData
microbiome
offtopic
updated 4.6 years ago by
James W. MacDonald
68k • written 4.6 years ago by
gwagz8
• 0
0
votes
1
reply
1.5k
views
Adding insect abundance data to SparCC Analysis
sparcc
Microbiome
microbiomeExplorer
MicrobiomeData
updated 4.7 years ago by
Kevin Blighe
★ 4.0k • written 4.7 years ago by
GlycineMax
• 0
8 results • Page
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Comment: Question on processing compound protein groups in limpa
by
JKim
• 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa
by
Gordon Smyth
53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
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Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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