Bioconductor Altcdfenvs

Showing : altcdfenvs • reset

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1.3k

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cdf probe altcdfenvs cdf probe altcdfenvs

18.0 years ago michael driscoll ▴ 30

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affymetrix microarrays frmatools altcdfenvs

updated 6.2 years ago by Matthew McCall ▴ 830 • written 6.2 years ago by osieman52 • 0

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959

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probe altcdfenvs probe altcdfenvs

updated 13.5 years ago by Laurent Gautier ★ 2.3k • written 13.5 years ago by Jack Luo ▴ 440

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970

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cdf affy altcdfenvs cdf affy altcdfenvs

updated 18.7 years ago by Sean Davis 21k • written 18.7 years ago by Rifat Hamoudi ▴ 30

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859

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cdf probe affy altcdfenvs cdf probe affy altcdfenvs

updated 12.9 years ago by James W. MacDonald 65k • written 12.9 years ago by Ariel Grostern ▴ 80

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930

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altcdfenvs altcdfenvs

updated 18.5 years ago by lgautier@altern.org ▴ 950 • written 18.5 years ago by Nicholas Lewin-Koh ▴ 430

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probe affy makecdfenv matchprobes altcdfenvs probe affy makecdfenv matchprobes altcdfenvs

updated 18.5 years ago by lgautier@altern.org ▴ 950 • written 18.5 years ago by Norman Pavelka ▴ 190

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GO cdf PROcess altcdfenvs GO cdf PROcess altcdfenvs

19.8 years ago Lana Schaffer ▴ 80

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probe affy altcdfenvs probe affy altcdfenvs

18.8 years ago Mette Langaas ▴ 10

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cdf probe affy altcdfenvs cdf probe affy altcdfenvs

12.9 years ago Ariel Grostern ▴ 80

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909

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cdf probe affy altcdfenvs cdf probe affy altcdfenvs

12.9 years ago Ariel Grostern ▴ 80

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910

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cdf probe altcdfenvs cdf probe altcdfenvs

19.1 years ago Wu, Xiwei ▴ 350

12 results • Page 1 of 1

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Answer: Once again a "Model matrix not full rank" by swbarnes2 ★ 1.3k

Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…

Answer: limma Intercept vs No-intercept models completely changing DMR results? by Gordon Smyth 50k

I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …

Answer: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…

Answer: limma Intercept vs No-intercept models completely changing DMR results? by James W. MacDonald 65k

This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…

Comment: CombineArrays for EPIC and EPIC V2 by Kim • 0

Thank you Tim, this is a great help in getting me started!

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Answer: limma Intercept vs No-intercept models completely changing DMR results?

Answer: CombineArrays for EPIC and EPIC V2

Answer: Too many significant genes when integrating gtex and tcga

Comment: Too many significant genes when integrating gtex and tcga

A: Print Differentially Expressed Exons From Dexseq Results

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