Bioconductor AssayData

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assayData() scRNA-seq single cell sequencing assayData Bioconductor

updated 5.3 years ago by Kevin Blighe ★ 4.0k • written 5.3 years ago by Wagaa ▴ 10

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Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0

Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …

Answer: Sharing a collection of datasets in ExperimentHub by shepherl 4.2k

107 packages would be a lot! It is certainly possible (and recommended) to implement one package that utilizes ExperimentHub for controlli…

Comment: GO.db and others package Download failure by James W. MacDonald 68k

Also, you never need to use anything but `BiocManager::install` to install any package, which has the beneficial side effect of ensuring th…

Comment: GO.db and others package Download failure by James W. MacDonald 68k

Yes. Your packages have odd Y version numbers (where the version is X.Y.Z). That means they are devel packages (release versions have even …

Comment: GO.db and others package Download failure by Skyler • 0

Am I using Bioc-devel?

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Comment: readDNAStringSet with non DNA characters

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