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News:
Nominations for Bioconductor Technical Advisory Board is open
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Bioc2022
Bioconductor
24 months ago
shepherl
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Bioc2022 In-person attendance lottery deadline this Sunday
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24 months ago
shepherl
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Bioc2022
Bioconductor
24 months ago
shepherl
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Bioconductor Scientific or Informatic Technology Advancement Award!
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Bioc2022
Bioconductor
written 2.0 years ago by
shepherl
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Bioconductor Long-term Contribution Award
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Bioc2022
Bioconductor
2.0 years ago
shepherl
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Bioc2022
Bioconductor
2.1 years ago
shepherl
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Bioconductor Community Engagement, Outreach, and Diversity Award
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2.1 years ago
shepherl
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Bioconductor Award for Outstanding Documentation
Bioc2022
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2.1 years ago
shepherl
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Bioc2022 Submissions for talks, demos, workshops and poster now open! Deadline Tomorrow March 29!
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bioc2022
2.3 years ago • updated 2.1 years ago
shepherl
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BioC2022 Seattle July 27-29 hybrid conference organizing committee
bioc2022
Conference
2.4 years ago
Levi Waldron
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Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
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Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
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