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updated 6.0 years ago by kayla.interdonato ▴ 160 • written 6.0 years ago by Jenny Drnevich ★ 2.0k

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Comment: Conumee with EPICv2 Segment function by zpingfeng • 0

I have the same issue too for the analysis lack of sample replicates. It was fine for the samples with replicates

Comment: Complex contrasts for between and within subject comparisons by wuwenhui2 • 0

@gordonsmyth Dear Dr. Smyth, in this design, I am interested to extract genes that have different expression profile at any of the time poi…

Comment: edgeR design between and within subjects by wuwenhui2 • 0

@luna Hi Aaron, Your explanation is very helpful. If having three time points instead of three cell types measured for each patient, usin…

Comment: Issue when attempting to use output from DECIPHER IDtaxa (pr2 V5) with dada2/phy by Daniel • 0

Two things: - PR2 version 5.0 and above have 9 levels and not 8 (up to version 4.14). So the code should be: > ranks.pr2 <- c("domain",…

Comment: Removing UTR from GTF for gene quantification by Michael Love 43k

Yes, we need to discourage tagging software packages arbitrarily on Bioconductor support site. This sends emails to the package maintainers…

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