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cghmcr
•
reset
0
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replies
944
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Error run cghMCR function in cghMCR package
cghmcr
7.9 years ago
ljia1180
• 0
0
votes
1
reply
1.3k
views
SGOL plot
cghMCR
cghMCR
updated 10.3 years ago by
pascal.gellert
• 0 • written 14.0 years ago by
viritha kaza
▴ 580
0
votes
2
replies
1.4k
views
questions on cghMCR package
DNAcopy
cghMCR
DNAcopy
cghMCR
updated 13.8 years ago by
Martin Morgan
25k • written 13.8 years ago by
nac
▴ 280
0
votes
0
replies
1.3k
views
Fwd: seeking help on cghMCR pleeeease
DNAcopy
cghMCR
DNAcopy
cghMCR
13.9 years ago
nac
▴ 280
0
votes
0
replies
1.2k
views
seeking help on cghMCR pleeeease
DNAcopy
cghMCR
DNAcopy
cghMCR
13.9 years ago
nac
▴ 280
0
votes
0
replies
1.3k
views
Help on cghMCR units of gapAllowed
DNAcopy
cghMCR
DNAcopy
cghMCR
13.9 years ago
nac
▴ 280
0
votes
0
replies
1.5k
views
cghMCR package:Is it possible to find MCR by not usingDNAcopy object?
PROcess
DNAcopy
cghMCR
PROcess
DNAcopy
cghMCR
14.1 years ago
viritha kaza
▴ 580
0
votes
1
reply
1.7k
views
cghMCR package:Is it possible to find MCR by not using DNAcopy object?
DNAcopy
cghMCR
DNAcopy
cghMCR
updated 14.1 years ago by
Jianhua Zhang
▴ 20 • written 14.1 years ago by
viritha kaza
▴ 580
0
votes
0
replies
1.1k
views
problem with readPositionalInfo() for Nimblegen for ArrayCGH
snapCGH
cghMCR
snapCGH
cghMCR
14.3 years ago
Muksitul Haque
▴ 10
0
votes
1
reply
1.1k
views
vector size issue in CGHMCR
cghMCR
cghMCR
updated 14.6 years ago by
Sean Davis
21k • written 14.6 years ago by
nac
▴ 280
0
votes
0
replies
1.4k
views
cghMCR package - Jianhua Zhang
DNAcopy
cghMCR
DNAcopy
cghMCR
15.8 years ago
Luz G Alonso
▴ 20
0
votes
0
replies
1.2k
views
Converting Seglist to segments file
Cancer
convert
DNAcopy
snapCGH
cghMCR
Cancer
convert
DNAcopy
snapCGH
cghMCR
18.3 years ago
Daniel Brewer
★ 1.9k
0
votes
1
reply
1.1k
views
cghMCR bug?
Cancer
DNAcopy
cghMCR
Cancer
DNAcopy
cghMCR
updated 18.8 years ago by
John Zhang
★ 2.9k • written 18.8 years ago by
Ramon Diaz
★ 1.1k
13 results • Page
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Answer: Using DESeq2 for age prediction
by
ATpoint
★ 5.0k
The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Aaron already answered your question. If you have an HDF5 file, it will be read in as a `TENxMatrix` object, which isn't actually read in -…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
dan.gatti
• 0
Very strange. We have the same package versions. I tried adding the mtx.class, type, and delayed arguments, but it's still making the coun…
Comment: DESeq2 for candidate gene analysis
by
piffelpaff
▴ 20
thank you so much for answering Dr. Love!
Answer: DESeq2 for candidate gene analysis
by
Michael Love
43k
Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…
Votes
A: Multi-level experiments in Limma
Answer: Should voomWithQualityWeights still be used when the sample-specific weights var
Answer: DESeq2 for candidate gene analysis
DESeq2 for candidate gene analysis
Answer: DESeq2 for candidate gene analysis
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