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cghmcr
•
reset
0
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958
views
Error run cghMCR function in cghMCR package
cghmcr
8.1 years ago
ljia1180
• 0
0
votes
1
reply
1.4k
views
SGOL plot
cghMCR
cghMCR
updated 10.5 years ago by
pascal.gellert
• 0 • written 14.1 years ago by
viritha kaza
▴ 580
0
votes
2
replies
1.5k
views
questions on cghMCR package
DNAcopy
cghMCR
DNAcopy
cghMCR
updated 13.9 years ago by
Martin Morgan
25k • written 13.9 years ago by
nac
▴ 280
0
votes
0
replies
1.3k
views
Fwd: seeking help on cghMCR pleeeease
DNAcopy
cghMCR
DNAcopy
cghMCR
14.0 years ago
nac
▴ 280
0
votes
0
replies
1.2k
views
seeking help on cghMCR pleeeease
DNAcopy
cghMCR
DNAcopy
cghMCR
14.0 years ago
nac
▴ 280
0
votes
0
replies
1.3k
views
Help on cghMCR units of gapAllowed
DNAcopy
cghMCR
DNAcopy
cghMCR
14.0 years ago
nac
▴ 280
0
votes
0
replies
1.5k
views
cghMCR package:Is it possible to find MCR by not usingDNAcopy object?
PROcess
DNAcopy
cghMCR
PROcess
DNAcopy
cghMCR
14.2 years ago
viritha kaza
▴ 580
0
votes
1
reply
1.7k
views
cghMCR package:Is it possible to find MCR by not using DNAcopy object?
DNAcopy
cghMCR
DNAcopy
cghMCR
updated 14.2 years ago by
Jianhua Zhang
▴ 20 • written 14.2 years ago by
viritha kaza
▴ 580
0
votes
0
replies
1.1k
views
problem with readPositionalInfo() for Nimblegen for ArrayCGH
snapCGH
cghMCR
snapCGH
cghMCR
14.4 years ago
Muksitul Haque
▴ 10
0
votes
1
reply
1.1k
views
vector size issue in CGHMCR
cghMCR
cghMCR
updated 14.7 years ago by
Sean Davis
21k • written 14.7 years ago by
nac
▴ 280
0
votes
0
replies
1.4k
views
cghMCR package - Jianhua Zhang
DNAcopy
cghMCR
DNAcopy
cghMCR
15.9 years ago
Luz G Alonso
▴ 20
0
votes
0
replies
1.2k
views
Converting Seglist to segments file
Cancer
convert
DNAcopy
snapCGH
cghMCR
Cancer
convert
DNAcopy
snapCGH
cghMCR
18.4 years ago
Daniel Brewer
★ 1.9k
0
votes
1
reply
1.2k
views
cghMCR bug?
Cancer
DNAcopy
cghMCR
Cancer
DNAcopy
cghMCR
updated 18.9 years ago by
John Zhang
★ 2.9k • written 18.9 years ago by
Ramon Diaz
★ 1.1k
13 results • Page
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Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment
by
Michael Love
43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA
by
Gordon Smyth
53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR
by
James W. MacDonald
68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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