Biostar Cghmcr

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cghmcr

3.8 years ago ljia1180 • 0

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730

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cghMCR cghMCR

updated 6.2 years ago by pascal.gellert • 0 • written 9.9 years ago by viritha kaza ▴ 580

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739

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DNAcopy cghMCR DNAcopy cghMCR

updated 9.7 years ago by Martin Morgan 25k • written 9.7 years ago by nac ▴ 280

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657

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DNAcopy cghMCR DNAcopy cghMCR

9.8 years ago nac ▴ 280

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637

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DNAcopy cghMCR DNAcopy cghMCR

9.8 years ago nac ▴ 280

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619

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DNAcopy cghMCR DNAcopy cghMCR

9.8 years ago nac ▴ 280

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794

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PROcess DNAcopy cghMCR PROcess DNAcopy cghMCR

10.0 years ago viritha kaza ▴ 580

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838

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DNAcopy cghMCR DNAcopy cghMCR

updated 10.0 years ago by Jianhua Zhang ▴ 20 • written 10.0 years ago by viritha kaza ▴ 580

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507

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snapCGH cghMCR snapCGH cghMCR

10.2 years ago Muksitul Haque ▴ 10

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491

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cghMCR cghMCR

updated 10.5 years ago by Sean Davis 21k • written 10.5 years ago by nac ▴ 280

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819

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DNAcopy cghMCR DNAcopy cghMCR

11.7 years ago Luz G Alonso ▴ 20

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497

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Cancer convert DNAcopy snapCGH cghMCR Cancer convert DNAcopy snapCGH cghMCR

14.2 years ago Daniel Brewer ★ 1.9k

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461

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Cancer DNAcopy cghMCR Cancer DNAcopy cghMCR

updated 14.7 years ago by John Zhang ★ 2.9k • written 14.7 years ago by Ramon Diaz ★ 1.1k

13 results • Page 1 of 1

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Comment: voom flips the sign relative to log(cpm) by Gordon Smyth 43k

Cross posted to Biostars https://www.biostars.org/p/9490039/

Answer: voom flips the sign relative to log(cpm) by Gordon Smyth 43k

The difference has nothing to do with limma or voom. On the right you applied TMM library size normalization. On the left you did no librar…

Answer: error: cannot execute 'f951': execvp: No such file or directory when downloading by Michael Love 34k

The answer is going to depend on how you installed R and Bioconductor, what OS and system you are on.

Comment: At least one covariate is confounded with batch! Please remove confounded covari by James W. MacDonald 58k

The error you get from `ComBat` comes from the test ``` qr(design)$rank < ncol(design) ``` And inside of `nonEstimable` is, as one might …

Comment: Understanding output of Negative Binomial in DESeq2 by swbarnes2 ▴ 850

Cross posted at Biostars: https://www.biostars.org/p/9490151/

Votes

Answer: Effect size using likelihood ratio test in DESeq2

Comment: ggtree install

Answer: Warning messages on Apple M1 BigSur

Comment: Use of coef() as a measure of effect size in a multiple regression using DESeq2

Answer: Log fold change interpretation of time series with Wald test

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Popular Question to Hans-Ulrich Klein ▴ 330