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Comment: errors in annotation
by
James W. MacDonald
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If you go to NCBI and the data appear to be correct, then they have evidently already fixed the errors you have found. The data we download…
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Under the hood `clusterProfiler` makes use of a (fast) GSEA algorithm implemented in the package `fgsea` (function `fgseaMultilevel`). The …
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CristEin
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In fact, I found that the author may have caused the problem
class(myNorm) %>% length() #equals 2
class(myNorm) == "data.…
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k.vitting.seerup
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Oh sorry I missed the species. Yes they also match for chicken :-) (both being called "ENSGALT..."). The other is from NCBI
Comment: Error in Create switchAnalyzeRlist
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bpshtiwan
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Ok, have you looked cDNA fasta file for Chicken (maternal Broiler)
Gallus gallus? I am using Kallisto for alignment and quantification. He…
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