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chippeakanno
•
reset
3
votes
7
replies
926
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Genes in open chromatin region
ChIPpeakAnno
DiffBind
written 8 months ago by
Chris
▴ 10
0
votes
0
replies
60
views
FindOverlaps, makeVennDiagram and "others"
ATACSeq
peaks
ATAC
ChIPpeakAnno
8 days ago
Raghad
• 0
0
votes
0
replies
218
views
Best method for annotating distal peaks
ChIPSeq
annotation
ChIPpeakAnno
3 months ago
nilanjanamani88
• 0
1
vote
5
replies
617
views
ChIPpeakAnno annotatePeakInBatch output
ChIPpeakAnno
7 months ago
ilaria.maurizio
• 0
0
votes
0
replies
306
views
Why there are two pfms in the result of oligoSummary function of ChIPpeakAnno package?
ChIPpeakAnno
ChIPSeq
MotifDiscovery
8 months ago
franciscrick41
• 0
2
votes
14
replies
1.2k
views
ChIPpeakAnno: S.lycopersicum annotation missing
ChIPpeakAnno
ChIPSeq
updated 9 months ago by
James W. MacDonald
66k • written 9 months ago by
Jerina
▴ 10
0
votes
1
reply
514
views
genomeStyles error in ChIPpeakAnno
Chippeakanno
ChIPpeakAnno
updated 10 months ago by
James W. MacDonald
66k • written 10 months ago by
Tami
• 0
7 results • Page
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Comment: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)?
by
ATpoint
★ 4.2k
The source script of the C function is available, just take it and compile the longestConsecutive function yourself, that's the easiest I g…
Comment: How to run allelic imbalance in apeglm
by
parayod376
• 0
Which I care about. [Papa's games][1] thank you for sharing the information. [1]: https://papasgamesfree.github.io
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
FYI, I emailed Benilton and he says he's working on a fix, so stay tuned!
Answer: Error in render R qmd document (could not find function "process")
by
James W. MacDonald
66k
If you have functions in another R document, you have to `source` that document to load the functions into your workspace. Just like you wo…
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
atan
• 0
Thank you! I ended up running it with a gtf on command line, partially because I couldn't figure out how to list multiple files in R for in…
Votes
Reduce the number of nodes appear in the cnetplot of clusterprofiler
A: DESeq2: add annotations (from data frame) to DESeqDataSet
Answer: Error in gseDO function
Comment: what the test method for enrichGO in clusterProfiler?
A: Comparison between two different group's pathway analysis results
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