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Comment: Confused about the design matrix in edgeR: How to tell R to consider one level a by Mohamed • 0

Thanks a lot, will try this and see.

Answer: Confused about the design matrix in edgeR: How to tell R to consider one level a by Steve Lianoglou 13k

> My question is why the design matrix named its last column ' StatusControl' and not 'statustreated' ? It's because the Intercept is th…

Comment: Italicise by Kevin Blighe 3.5k

Hi, can you compare the contents of your variable, `lab_italics` , versus those of the variable (`selectLab_italics`) that is produced in m…

Comment: Need help for ProStaR Stand-alone install by Wang • 0

Hi, I have installed the "Prostar" package, and loaded in my rstudio work session. But, when I trying to use the Prostar() for open a GUI …

Answer: Discrepancy between plot colours during exomeCopy tutorial by Michael Love 37k

I’m not sure why the plot looks this way. You may want to look at one sample at a time. Also note there are more developed tools, I haven’t…

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