Bioconductor Dba.peakset

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diffbind chip-seq dba.peakset

updated 4.6 years ago by Rory Stark ★ 5.2k • written 4.6 years ago by Theo ▴ 10

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diffbind dba.count dba.peakset

updated 6.1 years ago by Rory Stark ★ 5.2k • written 6.1 years ago by pau.rodriguez.sodupe • 0

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diffbind dba.peakset

updated 7.3 years ago by Rory Stark ★ 5.2k • written 7.3 years ago by fusion.slope ▴ 10

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

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Rsubread counting peaks ATACseq

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