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dnacopy
•
reset
0
votes
0
replies
1.5k
views
cghMCR package - Jianhua Zhang
DNAcopy
cghMCR
DNAcopy
cghMCR
16.1 years ago
Luz G Alonso
▴ 20
0
votes
0
replies
1.4k
views
DNAcopy segments.p function / Scoring CNVs
affy
DNAcopy
affy
DNAcopy
17.5 years ago
marco zucchelli
▴ 320
0
votes
2
replies
1.5k
views
CGH-like workflow for Affymetrix SNP 500k
aCGH
SNP
Cancer
DNAcopy
aCGH
aCGH
SNP
Cancer
DNAcopy
aCGH
updated 17.6 years ago by
Henrik Bengtsson
★ 2.4k • written 17.6 years ago by
Daniel Brewer
★ 1.9k
0
votes
3
replies
1.8k
views
CGH DNAcopy plot multiple samples on one plot
Cancer
DNAcopy
Cancer
DNAcopy
updated 18.2 years ago by
Gavin Kelly
▴ 50 • written 18.2 years ago by
Daniel Brewer
★ 1.9k
0
votes
8
replies
2.8k
views
segmentation aCGH data
Normalization
CGH
probe
limma
DNAcopy
snapCGH
Normalization
CGH
probe
limma
DNAcopy
18.3 years ago
jhs1jjm@leeds.ac.uk
▴ 230
0
votes
4
replies
2.0k
views
running time of snapCGH processCGH and runDNAcopy
aCGH
Survival
CGH
annotate
genefilter
affy
DNAcopy
aCGH
GLAD
tilingArray
snapCGH
aCGH
updated 18.3 years ago by
jhs1jjm@leeds.ac.uk
▴ 230 • written 18.3 years ago by
caiwei@mdanderson.org
▴ 110
0
votes
2
replies
1.6k
views
Chromosome 23 and 24 dropped after run snapCGH processCGH
aCGH
Survival
Cancer
annotate
genefilter
affy
DNAcopy
aCGH
GLAD
tilingArray
snapCGH
updated 18.3 years ago by
J-C. Marioni
▴ 40 • written 18.3 years ago by
caiwei@mdanderson.org
▴ 110
0
votes
1
reply
1.5k
views
DNAcopy package, craeting CNA object
CGH
marray
DNAcopy
CGH
marray
DNAcopy
updated 18.4 years ago by
Sean Davis
21k • written 18.4 years ago by
jhs1jjm@leeds.ac.uk
▴ 230
0
votes
1
reply
1.6k
views
DNAcopy plot just one sample
Cancer
DNAcopy
Cancer
DNAcopy
updated 18.5 years ago by
Martin Morgan
25k • written 18.5 years ago by
Daniel Brewer
★ 1.9k
0
votes
0
replies
1.0k
views
how to get fewer cut points with DNAcopy or GLAD
SNP
affy
DNAcopy
GLAD
SNP
affy
DNAcopy
GLAD
18.5 years ago
Wittner, Ben
▴ 290
0
votes
4
replies
1.8k
views
Removing libraries or using a particular function
Cancer
DNAcopy
Cancer
DNAcopy
updated 18.6 years ago by
Seth Falcon
★ 7.4k • written 18.6 years ago by
Daniel Brewer
★ 1.9k
0
votes
0
replies
1.2k
views
Converting Seglist to segments file
Cancer
convert
DNAcopy
snapCGH
cghMCR
Cancer
convert
DNAcopy
snapCGH
cghMCR
18.6 years ago
Daniel Brewer
★ 1.9k
0
votes
1
reply
1.2k
views
cghMCR bug?
Cancer
DNAcopy
cghMCR
Cancer
DNAcopy
cghMCR
updated 19.0 years ago by
John Zhang
★ 2.9k • written 19.0 years ago by
Ramon Diaz
★ 1.1k
0
votes
0
replies
1.4k
views
Detecting overrepresented genomic loci
aCGH
Clustering
CGH
geneplotter
DNAcopy
aCGH
GLAD
aCGH
Clustering
CGH
geneplotter
aCGH
20.9 years ago
Yi, Andrew
▴ 20
64 results • Page
2 of 2
Recent ...
Replies
Comment: msmsTests, inconsistent sign between lFC.Av and LogFC
by
Ben
• 0
Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…
Answer: DESeq2 for 16S rRNA Analysis
by
James W. MacDonald
68k
The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …
Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list'
by
varying.mastodon.isyn
• 0
Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …
Comment: Confirm that OpenStats will not be archived (pryr dependency)
by
Marina
• 0
Thank you!
Comment: AnnotationForge makeOrgPackage rsqlite_send_query error
by
ansley.r.burtch
• 0
Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …
Votes
A: DESeq2 - VST eliminates zero values
Comment: Normalise to a housekeeping gene in DESEq2
Comment: limpa analysis advice
C: AnnotationForge makeOrgPackage rsqlite_send_query error
Answer: Limpa Pipeline Order
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rcavalca
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James W. MacDonald
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James Aiden
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shepherl
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fl
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