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exome
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edgeR for looking at differences in coverage?
edgeR
exome
updated 3.3 years ago by
Aaron Lun
★ 27k • written 3.3 years ago by
am3
• 0
0
votes
1
reply
730
views
Whole exomes: number of genes, polymorphism
whole exome sequence
R
bioconductor
exome
5.5 years ago
bioinf
▴ 10
3
votes
6
replies
1.0k
views
Whole exome: BAM statistics and other relevant information
rsamtools
whole exome sequence
bam
exome
R
5.5 years ago
bioinf
▴ 10
0
votes
0
replies
740
views
any ideas on a workflow for exome seq data analysis with R?
exome
dnaseq
WES
6.2 years ago
arvand.akbari
• 0
0
votes
1
reply
926
views
ExomeDepth Package Error Messages
cnv
exome
6.5 years ago
Bio152
▴ 150
5 results • Page
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Answer: paired samples, comparing expression given a continuous variable
by
Gordon Smyth
46k
You including too many terms in the linear model. TimePoint and Total.Score give almost the same information. You can include either one of…
Comment: I cannot install "microbiome"
by
Marcel Ramos
570
Hi @61191329 , Unfortunately, I am unable to reproduce the issue on Windows. Please provide additional information, namely `BiocManager::v…
Comment: DESeq2 LFC changes sign after adjusting for surrogates
by
Marie
• 0
Thanks a lot!
Comment: how to use Rsamtools to parse extra fields from STAR alignment
by
Jiping Wang
▴ 90
Thanks so much! That's exactly the solution I am looking for.
Comment: Mapping genome regions to gene symbols
by
michaelwegert
• 0
function > elementLengths() was deprecated in S4Vectors version update 0.16.0 (in 2016?). \ So I used: > elementNROWS() [https://web.m…
Votes
A: log2FoldChange calculation in DESeq2 output
A: DESeq2 baseMean counts
Answer: error running UniProt.ws
error running UniProt.ws
Comment: DEXSeq: Error in reading counts from htseq "Error in FUN(X[[i]], ...) : subscrip
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sunnykevin97
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Alejandro Reyes
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Leonardo Collado Torres
▴ 1000
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ATpoint
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