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Comment: enrichKEGG results for non-model organism by Aciole.D • 0

If anyone still wondering about this: You can filter your 'kegg' object based on a list of target pathways. Look at these fields: `kegg@…

Comment: KEGG enrichment in R and gene IDs by Laia ▴ 10

I could finally solve this and I could get KEGG results :) Thank you so much for your help and quick replies. Best, Laia

Comment: KEGG enrichment in R and gene IDs by James W. MacDonald 62k

This part is the main issue. ``` ‘GOSemSim’ 2.22.0 is already loaded, but >= 2.23.1 is required ``` You should restart R and then re-insta…

Comment: Correct script for featurecounts in Rsubread by rmoorehe • 0

Thanks for the help. I was able to work through it using the bioconductor link. For some reason, I thought I had to create a new tab delimi…

Comment: DispEsts plot by Michael Love 39k

Are the pairs nested within batch or across?

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Answer: How edgeR estimate the common dispersion?

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