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Optimal cluster number identification using buildSNNgraph and igraph clusters
scran
gap statistics
single cell clustering
updated 2.9 years ago by
Aaron Lun
★ 28k • written 2.9 years ago by
p.joshi
▴ 40
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Comment: Help with error install csaw
by
James W. MacDonald
62k
Yes, it was downloaded, but you cannot install in a library directory for which you have no permissions. You could do ``` .libPaths(<path …
Comment: Help with error install csaw
by
Chris
• 0
Thank you. So seem the packages downloaded at ‘/tmp/RtmpCYqA2u/downloaded_packages’. But `module avail`, I don't see csaw. Would you tell m…
Answer: Help with error install csaw
by
James W. MacDonald
62k
I am not sure why you didn't think that was helpful? I mean it says ``` Error: ERROR: no permission to install to directory ‘/scg/apps…
Comment: Help with error install csaw
by
Chris
• 0
Sorry for that. I assumed it was not helpful in this case. BiocManager::install("csaw") 'getOption("repos")' replaces Bioconducto…
Comment: Help with error install csaw
by
James W. MacDonald
62k
You don't show the results from running `BiocManager::install("csaw")`
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Answer: Help with error install csaw
Comment: Help with error install csaw
Comment: Help with Error in DiffBind
GSVA: questions about the bootstrap p-value
Comment: Multifactorial Design for DESEQ2
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