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Comment: slidingIRanges in IRanges ... odd behavior by axelrhuber • 0
I ran into the same problem: see here the updated function, where I have included the fix by story.benjamin. I have tested it for widths an…
Comment: Advice for the analysis of microarray data with limma by Gordon Smyth 47k
You are reading research publications but it is just elementary statistics. Most introductory statistics courses will cover linear and quad…
Comment: Advice for the analysis of microarray data with limma by Sam • 0
I rather meant the basis behind your proposed approach. How do I know that I can model temporal effects without replicates by fitting ortho…
Comment: Not able to download recount3 data by Niveditha ▴ 10
Thank you for the update, Leo. I'll check on this and get back to you in case the issue still persists.
Comment: Error in .order_seqlevels(chrom_sizes[, "chrom"]) : !anyNA(m32) is not TRUE by Hervé Pagès 16k
See https://github.com/Bioconductor/GenomeInfoDb/issues/82#issuecomment-1409482932
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Comment: Sva and batch effect
closest-features equivalent in Bioconductor for finding closest gene(s)
Answer: Sva and batch effect
Answer: AnnotationForge::makeOrgPackage "argument is missing, with no default" Errors
Comment: Error in .order_seqlevels(chrom_sizes[, "chrom"]) : !anyNA(m32) is not TRUE
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