Biostar Genome annotation

Showing : genome annotation • reset

2

votes

2

replies

1.3k

views

ucsc gene set analysis genome annotation

updated 7.9 years ago by James W. MacDonald 62k • written 7.9 years ago by n_bormann1 • 0

1

vote

3

replies

1.1k

views

genome annotation drosophila melanogaster org.Mm.eg.db

updated 7.9 years ago by Marc Carlson ★ 7.2k • written 7.9 years ago by Patrick Schorderet ▴ 20

2 results • Page 1 of 1

Recent ...

Replies

Answer: How to getting synonymous SNPs from BiomaRt before timing out? by James W. MacDonald 62k

Asking for multiple things at once will tend to blow out your results, as you will get every possible combination. ``` > options(timeou…

Comment: Definition of disease_subtype abbreviations by Lucas Schiffer ▴ 240

Hi Sehyun, I do not know myself and can only find one reference in the [template.csv](https://github.com/waldronlab/curatedMetagenomicDataC…

Answer: Are polynomial contrasts for a time factor possible in DESeq2? by ATpoint ★ 2.3k

As you can use a model.matrix() as input for the design you can use a great variety of models. A great read is this work from Ritchie/Smyth…

Comment: does anyone how to create rarefaction curves from a phyloseq object? by RMiller • 0

I am not sure what you have tried, but the "vegan" library (package) has the ability to do rarefaction. So make sure to load `library("veg…

Answer: MSA package fails to be installed - installation of package ‘msa’ had non-zero by stitam • 0

Hi, I came across the same issue when trying to install `msa` in a docker (singularity) container. My base image was `debian:bullseye-20230…

Votes

Awards • All

Popular Question to Robert Castelo ★ 3.0k