Recent ...
Replies
Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
Yveto
•
0
Thank for your response. It is Illumina 450 K. I use this code
```{r }
library(IlluminaHumanMethylation450kanno.ilmn12.hg19)
annotat…
Answer: More regions in union when increasing DBA$config$mergeOverlap
by
Rory Stark
★
5.2k
I think the documentation is out of sync with the code. Positive values represent gaps between intervals and negative values represent how …
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed):
```
limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
•
0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★
4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Awards
• All
Scholar to
Rory Stark
★
5.2k
Popular Question to
tangming2005
▴
190
Popular Question to
Ian D.
▴
70
Popular Question to
junhui.li11
•
0
Scholar to
James W. MacDonald
65k
Locations
• All
Canada, 12 minutes ago
United States, 14 minutes ago
United States, 28 minutes ago
United States, 28 minutes ago
Melbourne, Australia, 30 minutes ago
Canada, 12 minutes ago
United States, 14 minutes ago
United States, 28 minutes ago
United States, 28 minutes ago
Melbourne, Australia, 30 minutes ago
Traffic: 590 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6