Biostar Gmapgenome

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gmapgenome gmapr fastafile

updated 5.7 years ago by Michael Lawrence 11k • written 5.7 years ago by Kyle Johnsen ▴ 20

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gmapr gmapgenome

updated 7.0 years ago by Michael Lawrence 11k • written 7.0 years ago by sean.taylor • 0

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gmapr gmapgenome annotationhub fafile

updated 7.2 years ago by Michael Lawrence 11k • written 7.2 years ago by Johannes Rainer ★ 2.0k

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gmapR GmapGenome error create

7.7 years ago lelemraposo • 0

4 results • Page 1 of 1

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Comment: Empty ChipQC Report by Okan • 0

Hi, I have the same issue. Have you found any solution or any reason why this is happening?

Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by Gordon Smyth 47k

Am I understanding correctly that you have 24 RNA-seq libraries in total, 6 from the pooled samples and 18 from regular samples with biolog…

Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by k.roelfs • 0

I'm sorry, I know it is kinda confusing... We have 6 pools in total: Phenotype A: T1a, T2, T1b, T1c Phenotype B: T1, T2 Each pool consist…

Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by Gordon Smyth 47k

Sorry, I don't understand your experiment. You are reading the edgeR Section on on what to do without replicates, but your experiment appe…

Answer: MA plot by Nathalie • 0

Thank you very much for your help and comments. There is errors in my file. BaseMean is BaseMeanLog2. I don't know how insert a file.

Votes

Comment: How to normalize long-read RNA-seq data for comparison with short-reads

Volcano Plot in R

Answer: Replicating iDEP parameters in DESeq2; two conditions and an interaction term.

Answer: MA plot

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