Bioconductor Harshlight

Showing : harshlight • reset

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1.7k

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affyPLM Harshlight affyPLM Harshlight

updated 11.3 years ago by Wolfgang Huber ★ 13k • written 11.3 years ago by Guest User ★ 13k

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1.6k

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Microarray Normalization hu6800 affy gcrma marray nnNorm Harshlight Microarray hu6800

11.4 years ago Scott Robinson ▴ 130

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1.6k

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affy Harshlight affy Harshlight

updated 13.3 years ago by Wolfgang Huber ★ 13k • written 13.3 years ago by Matthew McCormack ▴ 180

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866

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Harshlight Harshlight

14.1 years ago vasantika s ▴ 30

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924

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Harshlight Harshlight

15.4 years ago David Garfield ▴ 30

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1.6k

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cdf affxparser Harshlight cdf affxparser Harshlight

updated 16.7 years ago by James W. MacDonald 68k • written 16.7 years ago by Guido Hooiveld ★ 4.1k

6 results • Page 1 of 1

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Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

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Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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