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metabolite data
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1.2k
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XCMS2 of orbitrap data
metabolite data
xcms2
updated 4 months ago by
Elodie
• 0 • written 7.8 years ago by
Yashwant
▴ 10
5
votes
2
replies
1.3k
views
Is there any annotation package for MSEA?
metabolite data
updated 6.2 years ago by
shepherl
4.1k • written 6.2 years ago by
knishida
▴ 20
3
votes
5
replies
1.6k
views
Limma validity for only hundreds of genes/metabolites
limma
metabolite data
moderated t-test
updated 7.3 years ago by
Aaron Lun
★ 28k • written 7.3 years ago by
iglezer
• 0
2
votes
1
reply
1.2k
views
R package "metaboliteData" for package "pcaMethods"
metaboliteData
pcaMethods
pcamethods
r package
metabolite Data
updated 7.9 years ago by
Valerie Obenchain
★ 6.8k • written 7.9 years ago by
lukasz.galecki
▴ 10
4 results • Page
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Comment: Question about using LRT test for time course experiments with DESeq2
by
Denise
• 0
Not really, we are testing some toxic compounds to identify genes that are activated in response to the toxic exposure. Genes that change o…
Comment: Combining RNAseq and microarray data using edgeR/limma-voom
by
Adam Marstrand
• 0
Hi again, Thank you for the response! Can you expound on why it is not a good idea? I realize that the expression levels/differential expr…
Answer: Combining RNAseq and microarray data using edgeR/limma-voom
by
James W. MacDonald
67k
No, that's not a good idea at all. You should be doing a meta-analysis with these data rather than trying to combine like that. `GeneMeta` …
Answer: GOstats kegg analysis in wheat - help - none of the objects in the first column
by
James W. MacDonald
67k
Check the help page for `KEGGFrame`. Your columns are out of order.
Comment: Question about using LRT test for time course experiments with DESeq2
by
James W. MacDonald
67k
You are testing the interaction, so you are asking for those genes that change at any time *differently, depending on the treatment*. If co…
Votes
Answer: DecideTest vs topTAGs in edgeR
Comment: DESeq Input from Salmon + tximport/tximeta
Comment: DESeq Input from Salmon + tximport/tximeta
Comment: DESeq Input from Salmon + tximport/tximeta
Answer: DESeq Input from Salmon + tximport/tximeta
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