Bioconductor MinMQS

Showing : minMQS • reset

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RNA-Seq featureCounts STAR minMQS mapping quality score

updated 4.6 years ago by Gordon Smyth 48k • written 4.6 years ago by Gary ▴ 20

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Answer: DelayedArray::read_sparse_block by Hervé Pagès 16k

Hi Koki, Sorry again for the slow response. `read_sparse_block()` has been around for years. It's a generic function defined in the *…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

Sorry for missing that one too. When writting blocks to an HDF5 file, the `write_block()` method for HDF5RealizationSink or TENxRealizatio…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

Hi Koki, sorry for not seeing this before. > will SparseArraySeed in DelayedArray be replaced by this new sparse array format? Yes it wil…

Comment: Manual creation of qPCRset does not work by Ed Siefker ▴ 230

Thanks! This works for me.

Answer: Manual creation of qPCRset does not work by James W. MacDonald 63k

``` > mat <- matrix(rnorm(6*96), ncol = 6, nrow = 96, byrow = FALSE) > pd <- new("AnnotatedDataFrame", data = data.frame(1:6, row.names …

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Answer: Manual creation of qPCRset does not work

Answer: MDS plot edgeR

A: legend with gradient in ComplexHeatmap

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