Biostar Network

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WGCNA R network co-expression

updated 13 days ago by Peter Langfelder ★ 2.7k • written 3.8 years ago by avelarbio46 ▴ 10

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Network RNASeq WGCNA

updated 19 days ago by shuo • 0 • written 14 months ago by jms2520 • 0

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9

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416

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syntenet synteny Network

updated 21 days ago by alishakihn1 • 0 • written 9 weeks ago by Alexandros • 0

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Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by Gordon Smyth 47k

`PoolStatus` just indicates whether a sample is a pool or not, i.e., the first option.

Comment: How to map geneIds to ENTREZIDs by stacy.genovese • 0

James - I wish I knew where you lived so I could buy you a beer! Thank you so much for your help. I'm going to work now on converting th…

Answer: How to map geneIds to ENTREZIDs by James W. MacDonald 62k

You are close. But note that the geneIds in your `GRanges` object are NCBI Gene IDs, which used to be called Entrez Gene IDs, and which are…

Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by k.roelfs • 0

Just so I don't make a mistake, do I just tell voomLmFit if a sample is a pool or a replicate independent of each group, or do I have to sp…

Comment: I cannot install annotables package in Rstudio (macOS) by m-bihie ▴ 10

thanks, this worked!

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Answer: How to map geneIds to ENTREZIDs

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Scholar to James W. MacDonald 62k

Commentator to vs2001 ▴ 30

Scholar to Mike Smith ★ 5.9k